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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
PQITLWKRPIVTIKVEGQLREALLDTGADDTVLEDINLSGKWKPKIIGGIRGFVKVKQYE
DILIEICGHRAVGAVLVGPTPANIIGRNMLTQIGCTLNF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2p3d-a1-m1-cB 99 99 1.0000 1.0000 1.0000 1.54e-68 2p3d-a1-m1-cA_2p3d-a1-m1-cB
2 2p3d-a1-m1-cA 99 99 1.0000 1.0000 1.0000 1.54e-68 2p3d-a1-m1-cA_2p3d-a1-m1-cB
3 1mt9-a1-m1-cB 99 99 0.7879 0.7879 0.7879 1.89e-56 1mt9-a1-m1-cA_1mt9-a1-m1-cB
4 1mt9-a1-m1-cA 99 99 0.7879 0.7879 0.7879 1.89e-56 1mt9-a1-m1-cA_1mt9-a1-m1-cB
5 6ogt-a1-m2-cA 99 99 0.7980 0.7980 0.7980 3.24e-56 6ogt-a1-m1-cA_6ogt-a1-m2-cA
6 6ogt-a1-m1-cA 99 99 0.7980 0.7980 0.7980 3.24e-56 6ogt-a1-m1-cA_6ogt-a1-m2-cA
7 4mc2-a1-m1-cB 99 99 0.7778 0.7778 0.7778 5.09e-56 4mc2-a1-m1-cA_4mc2-a1-m1-cB
8 4mc2-a1-m1-cA 99 99 0.7778 0.7778 0.7778 5.09e-56 4mc2-a1-m1-cA_4mc2-a1-m1-cB
9 1ztz-a2-m2-cB 99 99 0.7778 0.7778 0.7778 5.09e-56 1ztz-a2-m1-cA_1ztz-a2-m2-cB, 1ztz-a2-m1-cB_1ztz-a2-m2-cB, 1ztz-a2-m2-cA_1ztz-a2-m2-cB
10 1ztz-a2-m2-cA 99 99 0.7778 0.7778 0.7778 5.09e-56 1ztz-a2-m2-cA_1ztz-a2-m2-cB
11 1ztz-a2-m1-cB 99 99 0.7778 0.7778 0.7778 5.09e-56 1ztz-a2-m1-cB_1ztz-a2-m2-cB
12 1ztz-a2-m1-cA 99 99 0.7778 0.7778 0.7778 5.09e-56 1ztz-a2-m1-cA_1ztz-a2-m2-cB
13 1kj4-a3-m4-cD 99 99 0.7778 0.7778 0.7778 1.20e-55 1kj4-a3-m3-cA_1kj4-a3-m4-cD, 1kj4-a3-m4-cA_1kj4-a3-m4-cD
14 1kj4-a3-m4-cC 99 99 0.7778 0.7778 0.7778 1.20e-55 1kj4-a3-m2-cB_1kj4-a3-m4-cC
15 1kj4-a3-m4-cB 99 99 0.7778 0.7778 0.7778 1.20e-55 1kj4-a3-m2-cB_1kj4-a3-m4-cB
16 1kj4-a3-m4-cA 99 99 0.7778 0.7778 0.7778 1.20e-55 1kj4-a3-m4-cA_1kj4-a3-m4-cD
17 1kj4-a3-m3-cA 99 99 0.7778 0.7778 0.7778 1.20e-55 1kj4-a3-m3-cA_1kj4-a3-m4-cD
18 1kj4-a3-m2-cB 99 99 0.7778 0.7778 0.7778 1.20e-55 1kj4-a3-m2-cB_1kj4-a3-m4-cB, 1kj4-a3-m2-cB_1kj4-a3-m4-cC
19 2p3c-a1-m1-cB 98 99 0.8283 0.8367 0.8283 1.37e-55 2p3c-a1-m1-cA_2p3c-a1-m1-cB
20 2p3c-a1-m1-cA 98 99 0.8283 0.8367 0.8283 1.37e-55 2p3c-a1-m1-cA_2p3c-a1-m1-cB
21 3oud-a1-m1-cA 99 99 0.7576 0.7576 0.7576 7.17e-55 3oud-a1-m1-cA_3oud-a1-m1-cB
22 3oud-a1-m1-cB 99 99 0.7475 0.7475 0.7475 2.59e-54 3oud-a1-m1-cA_3oud-a1-m1-cB
23 3ttp-a1-m1-cB 99 99 0.7374 0.7374 0.7374 1.20e-53 3ttp-a1-m1-cA_3ttp-a1-m1-cB
24 3ttp-a1-m1-cA 99 99 0.7374 0.7374 0.7374 1.20e-53 3ttp-a1-m1-cA_3ttp-a1-m1-cB
25 3ggu-a1-m1-cB 99 99 0.7172 0.7172 0.7172 1.22e-53 3ggu-a1-m1-cA_3ggu-a1-m1-cB
26 3ggu-a1-m1-cA 99 99 0.7172 0.7172 0.7172 1.22e-53 3ggu-a1-m1-cA_3ggu-a1-m1-cB
27 2f80-a2-m4-cB 99 99 0.7475 0.7475 0.7475 2.10e-53 2f80-a2-m1-cA_2f80-a2-m4-cB
28 2f80-a2-m1-cA 99 99 0.7475 0.7475 0.7475 2.10e-53 2f80-a2-m1-cA_2f80-a2-m4-cB
29 2rkg-a1-m1-cB 100 100 0.7374 0.7300 0.7300 7.50e-53 2rkg-a1-m1-cA_2rkg-a1-m1-cB
30 2rkg-a1-m1-cA 100 100 0.7374 0.7300 0.7300 7.50e-53 2rkg-a1-m1-cA_2rkg-a1-m1-cB
31 3t3c-a1-m1-cB 99 99 0.7172 0.7172 0.7172 1.11e-51 3t3c-a1-m1-cA_3t3c-a1-m1-cB
32 3t3c-a1-m1-cA 99 99 0.7172 0.7172 0.7172 1.11e-51 3t3c-a1-m1-cA_3t3c-a1-m1-cB
33 3u7s-a1-m1-cB 99 99 0.6869 0.6869 0.6869 3.21e-50 3u7s-a1-m1-cA_3u7s-a1-m1-cB
34 3u7s-a1-m1-cA 99 99 0.6869 0.6869 0.6869 3.21e-50 3u7s-a1-m1-cA_3u7s-a1-m1-cB
35 2azc-a2-m2-cB 99 99 0.7879 0.7879 0.7879 3.35e-50 2azc-a2-m1-cA_2azc-a2-m2-cB
36 2azc-a2-m2-cA 99 99 0.7879 0.7879 0.7879 3.35e-50 2azc-a2-m1-cA_2azc-a2-m2-cA
37 2azc-a2-m1-cA 99 99 0.7879 0.7879 0.7879 3.35e-50 2azc-a2-m1-cA_2azc-a2-m2-cA, 2azc-a2-m1-cA_2azc-a2-m2-cB
38 3mws-a1-m1-cB 99 99 0.7071 0.7071 0.7071 7.89e-50 3mws-a1-m1-cA_3mws-a1-m1-cB
39 3mws-a1-m1-cA 99 99 0.7071 0.7071 0.7071 7.89e-50 3mws-a1-m1-cA_3mws-a1-m1-cB
40 6p9a-a1-m1-cB 99 99 0.6970 0.6970 0.6970 9.72e-50 6p9a-a1-m1-cA_6p9a-a1-m1-cB
41 6p9a-a1-m1-cA 99 99 0.6970 0.6970 0.6970 9.72e-50 6p9a-a1-m1-cA_6p9a-a1-m1-cB
42 2b7z-a1-m1-cB 99 99 0.7677 0.7677 0.7677 8.91e-49 2b7z-a1-m1-cA_2b7z-a1-m1-cB
43 2b7z-a1-m1-cA 99 99 0.7677 0.7677 0.7677 8.91e-49 2b7z-a1-m1-cA_2b7z-a1-m1-cB
44 1k6c-a1-m1-cA 94 99 0.7374 0.7766 0.7374 9.43e-49 1k6c-a1-m1-cB_1k6c-a1-m1-cA
45 8dch-a1-m1-cB 99 99 0.6768 0.6768 0.6768 2.82e-48 8dch-a1-m1-cA_8dch-a1-m1-cB
46 8dch-a1-m1-cA 99 99 0.6768 0.6768 0.6768 2.82e-48 8dch-a1-m1-cA_8dch-a1-m1-cB
47 1k6c-a1-m1-cB 93 99 0.7374 0.7849 0.7374 1.59e-47 1k6c-a1-m1-cB_1k6c-a1-m1-cA
48 5b18-a2-m1-cD 99 99 0.6768 0.6768 0.6768 1.95e-43 5b18-a2-m1-cC_5b18-a2-m1-cD
49 5b18-a2-m1-cC 99 99 0.6768 0.6768 0.6768 1.95e-43 5b18-a2-m1-cC_5b18-a2-m1-cD
50 2sam-a1-m2-cA 99 99 0.5253 0.5253 0.5253 4.65e-35 2sam-a1-m1-cA_2sam-a1-m2-cA
51 2sam-a1-m1-cA 99 99 0.5253 0.5253 0.5253 4.65e-35 2sam-a1-m1-cA_2sam-a1-m2-cA
52 1bai-a1-m1-cB 124 90 0.3333 0.2661 0.3667 5.63e-05 1bai-a1-m1-cA_1bai-a1-m1-cB
53 1bai-a1-m1-cA 124 90 0.3333 0.2661 0.3667 5.63e-05 1bai-a1-m1-cA_1bai-a1-m1-cB
54 3nr6-a2-m4-cA 120 96 0.2626 0.2167 0.2708 0.004 3nr6-a2-m4-cB_3nr6-a2-m4-cA
55 2hah-a1-m2-cA 112 106 0.3737 0.3304 0.3491 0.026 2hah-a1-m1-cA_2hah-a1-m2-cA
56 2hah-a1-m1-cA 112 106 0.3737 0.3304 0.3491 0.026 2hah-a1-m1-cA_2hah-a1-m2-cA
57 2fmb-a1-m2-cA 104 98 0.2727 0.2596 0.2755 0.055 2fmb-a1-m1-cA_2fmb-a1-m2-cA
58 2fmb-a1-m1-cA 104 98 0.2727 0.2596 0.2755 0.055 2fmb-a1-m1-cA_2fmb-a1-m2-cA
59 6fiv-a1-m2-cA 112 31 0.1717 0.1518 0.5484 0.093 6fiv-a1-m1-cA_6fiv-a1-m2-cA
60 6fiv-a1-m1-cA 112 31 0.1717 0.1518 0.5484 0.093 6fiv-a1-m1-cA_6fiv-a1-m2-cA
61 3nr6-a2-m4-cB 114 95 0.2424 0.2105 0.2526 0.13 3nr6-a2-m2-cB_3nr6-a2-m4-cB, 3nr6-a2-m4-cB_3nr6-a2-m4-cA
62 3nr6-a2-m2-cB 114 95 0.2424 0.2105 0.2526 0.13 3nr6-a2-m2-cB_3nr6-a2-m4-cB
63 4h3d-a2-m1-cC 252 57 0.1616 0.0635 0.2807 3.4 4h3d-a2-m1-cC_4h3d-a2-m1-cD
64 4h3d-a2-m1-cD 253 57 0.1616 0.0632 0.2807 3.5 4h3d-a2-m1-cC_4h3d-a2-m1-cD
65 4mmo-a1-m1-cA 437 48 0.1212 0.0275 0.2500 3.9 4mmo-a1-m1-cB_4mmo-a1-m1-cA
66 4mmo-a1-m1-cB 382 30 0.1010 0.0262 0.3333 4.3 4mmo-a1-m1-cB_4mmo-a1-m1-cA
67 6el1-a1-m1-cT 332 78 0.2121 0.0633 0.2692 4.5 6el1-a1-m1-cS_6el1-a1-m1-cT
68 6el1-a1-m1-cS 332 78 0.2121 0.0633 0.2692 4.5 6el1-a1-m1-cS_6el1-a1-m1-cT
69 4coi-a1-m1-cB 611 34 0.1313 0.0213 0.3824 4.5 4coi-a1-m1-cA_4coi-a1-m1-cB
70 2pjr-a1-m1-cA 542 62 0.1919 0.0351 0.3065 7.6 2pjr-a1-m1-cA_2pjr-a1-m1-cF
71 2pjr-a1-m1-cF 544 62 0.1919 0.0349 0.3065 7.6 2pjr-a1-m1-cA_2pjr-a1-m1-cF
72 4coi-a1-m1-cA 606 22 0.1111 0.0182 0.5000 9.4 4coi-a1-m1-cA_4coi-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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