Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=99)
PQITLWKRPLVTIKIGGQLKEALIDTGADDTVLEEMNLPGRWKPKIIGGIGGLIKVRQYD
QIPIEICGHKAIGTVLIGPTPANIIGRNLLTQIGCTLNF

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 2azc-a2-m2-cB 99 99 1.0000 1.0000 1.0000 6.72e-67 2azc-a2-m1-cA_2azc-a2-m2-cB
2 2azc-a2-m2-cA 99 99 1.0000 1.0000 1.0000 6.72e-67 2azc-a2-m1-cA_2azc-a2-m2-cA
3 2azc-a2-m1-cA 99 99 1.0000 1.0000 1.0000 6.72e-67 2azc-a2-m1-cA_2azc-a2-m2-cA, 2azc-a2-m1-cA_2azc-a2-m2-cB
4 1mt9-a1-m1-cB 99 99 0.9192 0.9192 0.9192 2.91e-64 1mt9-a1-m1-cA_1mt9-a1-m1-cB
5 1mt9-a1-m1-cA 99 99 0.9192 0.9192 0.9192 2.91e-64 1mt9-a1-m1-cA_1mt9-a1-m1-cB
6 1kj4-a3-m4-cD 99 99 0.9091 0.9091 0.9091 1.45e-63 1kj4-a3-m3-cA_1kj4-a3-m4-cD, 1kj4-a3-m4-cA_1kj4-a3-m4-cD
7 1kj4-a3-m4-cC 99 99 0.9091 0.9091 0.9091 1.45e-63 1kj4-a3-m2-cB_1kj4-a3-m4-cC
8 1kj4-a3-m4-cB 99 99 0.9091 0.9091 0.9091 1.45e-63 1kj4-a3-m2-cB_1kj4-a3-m4-cB
9 1kj4-a3-m4-cA 99 99 0.9091 0.9091 0.9091 1.45e-63 1kj4-a3-m4-cA_1kj4-a3-m4-cD
10 1kj4-a3-m3-cA 99 99 0.9091 0.9091 0.9091 1.45e-63 1kj4-a3-m3-cA_1kj4-a3-m4-cD
11 1kj4-a3-m2-cB 99 99 0.9091 0.9091 0.9091 1.45e-63 1kj4-a3-m2-cB_1kj4-a3-m4-cB, 1kj4-a3-m2-cB_1kj4-a3-m4-cC
12 4mc2-a1-m1-cB 99 99 0.9192 0.9192 0.9192 9.15e-63 4mc2-a1-m1-cA_4mc2-a1-m1-cB
13 4mc2-a1-m1-cA 99 99 0.9192 0.9192 0.9192 9.15e-63 4mc2-a1-m1-cA_4mc2-a1-m1-cB
14 1ztz-a2-m2-cB 99 99 0.9192 0.9192 0.9192 9.15e-63 1ztz-a2-m1-cA_1ztz-a2-m2-cB, 1ztz-a2-m1-cB_1ztz-a2-m2-cB, 1ztz-a2-m2-cA_1ztz-a2-m2-cB
15 1ztz-a2-m2-cA 99 99 0.9192 0.9192 0.9192 9.15e-63 1ztz-a2-m2-cA_1ztz-a2-m2-cB
16 1ztz-a2-m1-cB 99 99 0.9192 0.9192 0.9192 9.15e-63 1ztz-a2-m1-cB_1ztz-a2-m2-cB
17 1ztz-a2-m1-cA 99 99 0.9192 0.9192 0.9192 9.15e-63 1ztz-a2-m1-cA_1ztz-a2-m2-cB
18 3oud-a1-m1-cA 99 99 0.8586 0.8586 0.8586 1.25e-61 3oud-a1-m1-cA_3oud-a1-m1-cB
19 6ogt-a1-m2-cA 99 99 0.8485 0.8485 0.8485 3.00e-61 6ogt-a1-m1-cA_6ogt-a1-m2-cA
20 6ogt-a1-m1-cA 99 99 0.8485 0.8485 0.8485 3.00e-61 6ogt-a1-m1-cA_6ogt-a1-m2-cA
21 3oud-a1-m1-cB 99 99 0.8485 0.8485 0.8485 5.31e-61 3oud-a1-m1-cA_3oud-a1-m1-cB
22 2f80-a2-m4-cB 99 99 0.8889 0.8889 0.8889 3.59e-60 2f80-a2-m1-cA_2f80-a2-m4-cB
23 2f80-a2-m1-cA 99 99 0.8889 0.8889 0.8889 3.59e-60 2f80-a2-m1-cA_2f80-a2-m4-cB
24 3u7s-a1-m1-cB 99 99 0.7879 0.7879 0.7879 2.59e-58 3u7s-a1-m1-cA_3u7s-a1-m1-cB
25 3u7s-a1-m1-cA 99 99 0.7879 0.7879 0.7879 2.59e-58 3u7s-a1-m1-cA_3u7s-a1-m1-cB
26 2rkg-a1-m1-cB 100 100 0.8283 0.8200 0.8200 1.03e-57 2rkg-a1-m1-cA_2rkg-a1-m1-cB
27 2rkg-a1-m1-cA 100 100 0.8283 0.8200 0.8200 1.03e-57 2rkg-a1-m1-cA_2rkg-a1-m1-cB
28 3ggu-a1-m1-cB 99 99 0.7677 0.7677 0.7677 5.31e-57 3ggu-a1-m1-cA_3ggu-a1-m1-cB
29 3ggu-a1-m1-cA 99 99 0.7677 0.7677 0.7677 5.31e-57 3ggu-a1-m1-cA_3ggu-a1-m1-cB
30 2p3d-a1-m1-cB 99 99 0.7879 0.7879 0.7879 6.27e-56 2p3d-a1-m1-cA_2p3d-a1-m1-cB
31 2p3d-a1-m1-cA 99 99 0.7879 0.7879 0.7879 6.27e-56 2p3d-a1-m1-cA_2p3d-a1-m1-cB
32 1k6c-a1-m1-cA 94 99 0.8687 0.9149 0.8687 7.98e-56 1k6c-a1-m1-cB_1k6c-a1-m1-cA
33 2p3c-a1-m1-cB 98 99 0.8182 0.8265 0.8182 9.12e-56 2p3c-a1-m1-cA_2p3c-a1-m1-cB
34 2p3c-a1-m1-cA 98 99 0.8182 0.8265 0.8182 9.12e-56 2p3c-a1-m1-cA_2p3c-a1-m1-cB
35 2b7z-a1-m1-cB 99 99 0.8788 0.8788 0.8788 2.31e-55 2b7z-a1-m1-cA_2b7z-a1-m1-cB
36 2b7z-a1-m1-cA 99 99 0.8788 0.8788 0.8788 2.31e-55 2b7z-a1-m1-cA_2b7z-a1-m1-cB
37 3ttp-a1-m1-cB 99 99 0.7576 0.7576 0.7576 3.08e-55 3ttp-a1-m1-cA_3ttp-a1-m1-cB
38 3ttp-a1-m1-cA 99 99 0.7576 0.7576 0.7576 3.08e-55 3ttp-a1-m1-cA_3ttp-a1-m1-cB
39 1k6c-a1-m1-cB 93 99 0.8687 0.9247 0.8687 2.22e-54 1k6c-a1-m1-cB_1k6c-a1-m1-cA
40 6p9a-a1-m1-cB 99 99 0.7475 0.7475 0.7475 2.86e-54 6p9a-a1-m1-cA_6p9a-a1-m1-cB
41 6p9a-a1-m1-cA 99 99 0.7475 0.7475 0.7475 2.86e-54 6p9a-a1-m1-cA_6p9a-a1-m1-cB
42 8dch-a1-m1-cB 99 99 0.7475 0.7475 0.7475 3.64e-54 8dch-a1-m1-cA_8dch-a1-m1-cB
43 8dch-a1-m1-cA 99 99 0.7475 0.7475 0.7475 3.64e-54 8dch-a1-m1-cA_8dch-a1-m1-cB
44 3t3c-a1-m1-cB 99 99 0.7273 0.7273 0.7273 3.30e-53 3t3c-a1-m1-cA_3t3c-a1-m1-cB
45 3t3c-a1-m1-cA 99 99 0.7273 0.7273 0.7273 3.30e-53 3t3c-a1-m1-cA_3t3c-a1-m1-cB
46 3mws-a1-m1-cB 99 99 0.7273 0.7273 0.7273 2.07e-51 3mws-a1-m1-cA_3mws-a1-m1-cB
47 3mws-a1-m1-cA 99 99 0.7273 0.7273 0.7273 2.07e-51 3mws-a1-m1-cA_3mws-a1-m1-cB
48 5b18-a2-m1-cD 99 99 0.7980 0.7980 0.7980 2.26e-50 5b18-a2-m1-cC_5b18-a2-m1-cD
49 5b18-a2-m1-cC 99 99 0.7980 0.7980 0.7980 2.26e-50 5b18-a2-m1-cC_5b18-a2-m1-cD
50 2sam-a1-m2-cA 99 99 0.5152 0.5152 0.5152 1.82e-32 2sam-a1-m1-cA_2sam-a1-m2-cA
51 2sam-a1-m1-cA 99 99 0.5152 0.5152 0.5152 1.82e-32 2sam-a1-m1-cA_2sam-a1-m2-cA
52 1bai-a1-m1-cB 124 90 0.3535 0.2823 0.3889 1.82e-06 1bai-a1-m1-cA_1bai-a1-m1-cB
53 1bai-a1-m1-cA 124 90 0.3535 0.2823 0.3889 1.82e-06 1bai-a1-m1-cA_1bai-a1-m1-cB
54 3nr6-a2-m4-cB 114 93 0.2727 0.2368 0.2903 1.84e-04 3nr6-a2-m2-cB_3nr6-a2-m4-cB, 3nr6-a2-m4-cB_3nr6-a2-m4-cA
55 3nr6-a2-m2-cB 114 93 0.2727 0.2368 0.2903 1.84e-04 3nr6-a2-m2-cB_3nr6-a2-m4-cB
56 3nr6-a2-m4-cA 120 93 0.2727 0.2250 0.2903 4.33e-04 3nr6-a2-m4-cB_3nr6-a2-m4-cA
57 2hah-a1-m2-cA 112 108 0.3434 0.3036 0.3148 0.076 2hah-a1-m1-cA_2hah-a1-m2-cA
58 2hah-a1-m1-cA 112 108 0.3434 0.3036 0.3148 0.076 2hah-a1-m1-cA_2hah-a1-m2-cA
59 2fmb-a1-m2-cA 104 99 0.2929 0.2788 0.2929 0.086 2fmb-a1-m1-cA_2fmb-a1-m2-cA
60 2fmb-a1-m1-cA 104 99 0.2929 0.2788 0.2929 0.086 2fmb-a1-m1-cA_2fmb-a1-m2-cA
61 6fiv-a1-m2-cA 112 35 0.1515 0.1339 0.4286 0.25 6fiv-a1-m1-cA_6fiv-a1-m2-cA
62 6fiv-a1-m1-cA 112 35 0.1515 0.1339 0.4286 0.25 6fiv-a1-m1-cA_6fiv-a1-m2-cA
63 6el1-a1-m1-cT 332 74 0.2424 0.0723 0.3243 0.35 6el1-a1-m1-cS_6el1-a1-m1-cT
64 6el1-a1-m1-cS 332 74 0.2424 0.0723 0.3243 0.35 6el1-a1-m1-cS_6el1-a1-m1-cT
65 3n89-a3-m2-cB 319 35 0.1212 0.0376 0.3429 3.0 3n89-a3-m2-cB_3n89-a3-m1-cA
66 3n89-a3-m1-cA 337 35 0.1212 0.0356 0.3429 3.0 3n89-a3-m2-cB_3n89-a3-m1-cA
67 2rsp-a1-m1-cA 115 29 0.1212 0.1043 0.4138 5.1 2rsp-a1-m1-cB_2rsp-a1-m1-cA
68 2rsp-a1-m1-cB 113 21 0.1010 0.0885 0.4762 5.8 2rsp-a1-m1-cB_2rsp-a1-m1-cA
69 3f1c-a1-m1-cA 229 30 0.1212 0.0524 0.4000 6.4 3f1c-a1-m1-cA_3f1c-a1-m1-cB
70 3f1c-a1-m1-cB 230 30 0.1212 0.0522 0.4000 6.7 3f1c-a1-m1-cA_3f1c-a1-m1-cB
71 2inr-a1-m2-cA 442 25 0.1111 0.0249 0.4400 7.7 2inr-a1-m1-cA_2inr-a1-m2-cA
72 2inr-a1-m1-cA 442 25 0.1111 0.0249 0.4400 7.7 2inr-a1-m1-cA_2inr-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600