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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
PQITLWKRPLVTIRIGGQLKEALLDTGADDTLMNLPGRWKPKMIGGGFIKVRQYDQIPIE
ICGHKAIGTVLVGPTPTNIGRNLLTQIGCTLNF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1k6c-a1-m1-cB 93 93 1.0000 1.0000 1.0000 7.67e-64 1k6c-a1-m1-cB_1k6c-a1-m1-cA
2 1k6c-a1-m1-cA 94 95 0.9892 0.9787 0.9684 5.74e-58 1k6c-a1-m1-cB_1k6c-a1-m1-cA
3 1mt9-a1-m1-cB 99 99 0.9462 0.8889 0.8889 7.59e-56 1mt9-a1-m1-cA_1mt9-a1-m1-cB
4 1mt9-a1-m1-cA 99 99 0.9462 0.8889 0.8889 7.59e-56 1mt9-a1-m1-cA_1mt9-a1-m1-cB
5 1kj4-a3-m4-cD 99 99 0.9462 0.8889 0.8889 1.02e-55 1kj4-a3-m3-cA_1kj4-a3-m4-cD, 1kj4-a3-m4-cA_1kj4-a3-m4-cD
6 1kj4-a3-m4-cC 99 99 0.9462 0.8889 0.8889 1.02e-55 1kj4-a3-m2-cB_1kj4-a3-m4-cC
7 1kj4-a3-m4-cB 99 99 0.9462 0.8889 0.8889 1.02e-55 1kj4-a3-m2-cB_1kj4-a3-m4-cB
8 1kj4-a3-m4-cA 99 99 0.9462 0.8889 0.8889 1.02e-55 1kj4-a3-m4-cA_1kj4-a3-m4-cD
9 1kj4-a3-m3-cA 99 99 0.9462 0.8889 0.8889 1.02e-55 1kj4-a3-m3-cA_1kj4-a3-m4-cD
10 1kj4-a3-m2-cB 99 99 0.9462 0.8889 0.8889 1.02e-55 1kj4-a3-m2-cB_1kj4-a3-m4-cB, 1kj4-a3-m2-cB_1kj4-a3-m4-cC
11 4mc2-a1-m1-cB 99 99 0.9462 0.8889 0.8889 9.69e-55 4mc2-a1-m1-cA_4mc2-a1-m1-cB
12 4mc2-a1-m1-cA 99 99 0.9462 0.8889 0.8889 9.69e-55 4mc2-a1-m1-cA_4mc2-a1-m1-cB
13 1ztz-a2-m2-cB 99 99 0.9462 0.8889 0.8889 9.69e-55 1ztz-a2-m1-cA_1ztz-a2-m2-cB, 1ztz-a2-m1-cB_1ztz-a2-m2-cB, 1ztz-a2-m2-cA_1ztz-a2-m2-cB
14 1ztz-a2-m2-cA 99 99 0.9462 0.8889 0.8889 9.69e-55 1ztz-a2-m2-cA_1ztz-a2-m2-cB
15 1ztz-a2-m1-cB 99 99 0.9462 0.8889 0.8889 9.69e-55 1ztz-a2-m1-cB_1ztz-a2-m2-cB
16 1ztz-a2-m1-cA 99 99 0.9462 0.8889 0.8889 9.69e-55 1ztz-a2-m1-cA_1ztz-a2-m2-cB
17 3oud-a1-m1-cA 99 99 0.8817 0.8283 0.8283 1.94e-53 3oud-a1-m1-cA_3oud-a1-m1-cB
18 3oud-a1-m1-cB 99 99 0.8817 0.8283 0.8283 5.09e-53 3oud-a1-m1-cA_3oud-a1-m1-cB
19 6ogt-a1-m2-cA 99 99 0.8602 0.8081 0.8081 2.95e-52 6ogt-a1-m1-cA_6ogt-a1-m2-cA
20 6ogt-a1-m1-cA 99 99 0.8602 0.8081 0.8081 2.95e-52 6ogt-a1-m1-cA_6ogt-a1-m2-cA
21 2f80-a2-m4-cB 99 99 0.9140 0.8586 0.8586 3.88e-52 2f80-a2-m1-cA_2f80-a2-m4-cB
22 2f80-a2-m1-cA 99 99 0.9140 0.8586 0.8586 3.88e-52 2f80-a2-m1-cA_2f80-a2-m4-cB
23 3u7s-a1-m1-cB 99 99 0.8065 0.7576 0.7576 8.30e-50 3u7s-a1-m1-cA_3u7s-a1-m1-cB
24 3u7s-a1-m1-cA 99 99 0.8065 0.7576 0.7576 8.30e-50 3u7s-a1-m1-cA_3u7s-a1-m1-cB
25 2azc-a2-m2-cB 99 99 0.9032 0.8485 0.8485 1.59e-49 2azc-a2-m1-cA_2azc-a2-m2-cB
26 2azc-a2-m2-cA 99 99 0.9032 0.8485 0.8485 1.59e-49 2azc-a2-m1-cA_2azc-a2-m2-cA
27 2azc-a2-m1-cA 99 99 0.9032 0.8485 0.8485 1.59e-49 2azc-a2-m1-cA_2azc-a2-m2-cA, 2azc-a2-m1-cA_2azc-a2-m2-cB
28 2rkg-a1-m1-cB 100 100 0.8280 0.7700 0.7700 2.30e-49 2rkg-a1-m1-cA_2rkg-a1-m1-cB
29 2rkg-a1-m1-cA 100 100 0.8280 0.7700 0.7700 2.30e-49 2rkg-a1-m1-cA_2rkg-a1-m1-cB
30 3ggu-a1-m1-cB 99 99 0.7957 0.7475 0.7475 8.60e-49 3ggu-a1-m1-cA_3ggu-a1-m1-cB
31 3ggu-a1-m1-cA 99 99 0.7957 0.7475 0.7475 8.60e-49 3ggu-a1-m1-cA_3ggu-a1-m1-cB
32 2p3c-a1-m1-cB 98 99 0.8387 0.7959 0.7879 3.32e-48 2p3c-a1-m1-cA_2p3c-a1-m1-cB
33 2p3c-a1-m1-cA 98 99 0.8387 0.7959 0.7879 3.32e-48 2p3c-a1-m1-cA_2p3c-a1-m1-cB
34 3ttp-a1-m1-cB 99 99 0.7957 0.7475 0.7475 1.36e-47 3ttp-a1-m1-cA_3ttp-a1-m1-cB
35 3ttp-a1-m1-cA 99 99 0.7957 0.7475 0.7475 1.36e-47 3ttp-a1-m1-cA_3ttp-a1-m1-cB
36 2p3d-a1-m1-cB 99 99 0.7849 0.7374 0.7374 1.49e-47 2p3d-a1-m1-cA_2p3d-a1-m1-cB
37 2p3d-a1-m1-cA 99 99 0.7849 0.7374 0.7374 1.49e-47 2p3d-a1-m1-cA_2p3d-a1-m1-cB
38 2b7z-a1-m1-cB 99 99 0.8602 0.8081 0.8081 4.98e-47 2b7z-a1-m1-cA_2b7z-a1-m1-cB
39 2b7z-a1-m1-cA 99 99 0.8602 0.8081 0.8081 4.98e-47 2b7z-a1-m1-cA_2b7z-a1-m1-cB
40 8dch-a1-m1-cB 99 99 0.7742 0.7273 0.7273 2.76e-46 8dch-a1-m1-cA_8dch-a1-m1-cB
41 8dch-a1-m1-cA 99 99 0.7742 0.7273 0.7273 2.76e-46 8dch-a1-m1-cA_8dch-a1-m1-cB
42 3t3c-a1-m1-cB 99 99 0.7742 0.7273 0.7273 4.93e-46 3t3c-a1-m1-cA_3t3c-a1-m1-cB
43 3t3c-a1-m1-cA 99 99 0.7742 0.7273 0.7273 4.93e-46 3t3c-a1-m1-cA_3t3c-a1-m1-cB
44 6p9a-a1-m1-cB 99 99 0.7527 0.7071 0.7071 5.15e-46 6p9a-a1-m1-cA_6p9a-a1-m1-cB
45 6p9a-a1-m1-cA 99 99 0.7527 0.7071 0.7071 5.15e-46 6p9a-a1-m1-cA_6p9a-a1-m1-cB
46 3mws-a1-m1-cB 99 99 0.7419 0.6970 0.6970 2.83e-43 3mws-a1-m1-cA_3mws-a1-m1-cB
47 3mws-a1-m1-cA 99 99 0.7419 0.6970 0.6970 2.83e-43 3mws-a1-m1-cA_3mws-a1-m1-cB
48 5b18-a2-m1-cD 99 99 0.7634 0.7172 0.7172 1.20e-41 5b18-a2-m1-cC_5b18-a2-m1-cD
49 5b18-a2-m1-cC 99 99 0.7634 0.7172 0.7172 1.20e-41 5b18-a2-m1-cC_5b18-a2-m1-cD
50 2sam-a1-m2-cA 99 99 0.5376 0.5051 0.5051 1.42e-26 2sam-a1-m1-cA_2sam-a1-m2-cA
51 2sam-a1-m1-cA 99 99 0.5376 0.5051 0.5051 1.42e-26 2sam-a1-m1-cA_2sam-a1-m2-cA
52 6fiv-a1-m2-cA 112 31 0.1720 0.1429 0.5161 0.058 6fiv-a1-m1-cA_6fiv-a1-m2-cA
53 6fiv-a1-m1-cA 112 31 0.1720 0.1429 0.5161 0.058 6fiv-a1-m1-cA_6fiv-a1-m2-cA
54 2hah-a1-m2-cA 112 31 0.1720 0.1429 0.5161 0.059 2hah-a1-m1-cA_2hah-a1-m2-cA
55 2hah-a1-m1-cA 112 31 0.1720 0.1429 0.5161 0.059 2hah-a1-m1-cA_2hah-a1-m2-cA
56 1bai-a1-m1-cB 124 89 0.3548 0.2661 0.3708 0.49 1bai-a1-m1-cA_1bai-a1-m1-cB
57 1bai-a1-m1-cA 124 89 0.3548 0.2661 0.3708 0.49 1bai-a1-m1-cA_1bai-a1-m1-cB
58 1kpl-a2-m1-cC 430 56 0.2043 0.0442 0.3393 0.62 1kpl-a2-m1-cC_1kpl-a2-m1-cD
59 1kpl-a2-m1-cD 451 56 0.2043 0.0421 0.3393 0.64 1kpl-a2-m1-cC_1kpl-a2-m1-cD
60 3nr6-a2-m4-cA 120 89 0.2473 0.1917 0.2584 0.85 3nr6-a2-m4-cB_3nr6-a2-m4-cA
61 3nr6-a2-m4-cB 114 89 0.2581 0.2105 0.2697 1.1 3nr6-a2-m2-cB_3nr6-a2-m4-cB, 3nr6-a2-m4-cB_3nr6-a2-m4-cA
62 3nr6-a2-m2-cB 114 89 0.2581 0.2105 0.2697 1.1 3nr6-a2-m2-cB_3nr6-a2-m4-cB
63 1mxs-a1-m3-cA 216 57 0.1935 0.0833 0.3158 1.8 1mxs-a1-m2-cA_1mxs-a1-m3-cA
64 1mxs-a1-m2-cA 216 57 0.1935 0.0833 0.3158 1.8 1mxs-a1-m2-cA_1mxs-a1-m3-cA
65 2fmb-a1-m2-cA 104 98 0.2796 0.2500 0.2653 3.0 2fmb-a1-m1-cA_2fmb-a1-m2-cA
66 2fmb-a1-m1-cA 104 98 0.2796 0.2500 0.2653 3.0 2fmb-a1-m1-cA_2fmb-a1-m2-cA
67 5a9s-a1-m1-cA 280 44 0.1935 0.0643 0.4091 5.4 5a9s-a1-m1-cA_5a9s-a1-m1-cB
68 5a9s-a1-m1-cB 282 44 0.1935 0.0638 0.4091 5.7 5a9s-a1-m1-cA_5a9s-a1-m1-cB
69 3u49-a1-m1-cA 249 54 0.1290 0.0482 0.2222 8.3 3u49-a1-m1-cA_3u49-a1-m1-cC
70 2jd1-a1-m1-cB 379 70 0.2258 0.0554 0.3000 9.0 2jd1-a1-m1-cA_2jd1-a1-m1-cB
71 2jd1-a1-m1-cA 379 70 0.2258 0.0554 0.3000 9.0 2jd1-a1-m1-cA_2jd1-a1-m1-cB
72 3u49-a1-m1-cC 252 54 0.1290 0.0476 0.2222 9.7 3u49-a1-m1-cA_3u49-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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