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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLMNLPGRWKPKMGGGFIKVRQYDQIPIE
ICGHKAIGTVLVGPTPTNVIGRNLLTQIGCTLNF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1k6c-a1-m1-cA 94 94 1.0000 1.0000 1.0000 1.25e-64 1k6c-a1-m1-cB_1k6c-a1-m1-cA
2 1k6c-a1-m1-cB 93 95 0.9787 0.9892 0.9684 5.80e-58 1k6c-a1-m1-cB_1k6c-a1-m1-cA
3 1mt9-a1-m1-cB 99 99 0.9362 0.8889 0.8889 4.00e-57 1mt9-a1-m1-cA_1mt9-a1-m1-cB
4 1mt9-a1-m1-cA 99 99 0.9362 0.8889 0.8889 4.00e-57 1mt9-a1-m1-cA_1mt9-a1-m1-cB
5 1kj4-a3-m4-cD 99 99 0.9362 0.8889 0.8889 4.46e-57 1kj4-a3-m3-cA_1kj4-a3-m4-cD, 1kj4-a3-m4-cA_1kj4-a3-m4-cD
6 1kj4-a3-m4-cC 99 99 0.9362 0.8889 0.8889 4.46e-57 1kj4-a3-m2-cB_1kj4-a3-m4-cC
7 1kj4-a3-m4-cB 99 99 0.9362 0.8889 0.8889 4.46e-57 1kj4-a3-m2-cB_1kj4-a3-m4-cB
8 1kj4-a3-m4-cA 99 99 0.9362 0.8889 0.8889 4.46e-57 1kj4-a3-m4-cA_1kj4-a3-m4-cD
9 1kj4-a3-m3-cA 99 99 0.9362 0.8889 0.8889 4.46e-57 1kj4-a3-m3-cA_1kj4-a3-m4-cD
10 1kj4-a3-m2-cB 99 99 0.9362 0.8889 0.8889 4.46e-57 1kj4-a3-m2-cB_1kj4-a3-m4-cB, 1kj4-a3-m2-cB_1kj4-a3-m4-cC
11 4mc2-a1-m1-cB 99 99 0.9255 0.8788 0.8788 1.11e-55 4mc2-a1-m1-cA_4mc2-a1-m1-cB
12 4mc2-a1-m1-cA 99 99 0.9255 0.8788 0.8788 1.11e-55 4mc2-a1-m1-cA_4mc2-a1-m1-cB
13 1ztz-a2-m2-cB 99 99 0.9255 0.8788 0.8788 1.11e-55 1ztz-a2-m1-cA_1ztz-a2-m2-cB, 1ztz-a2-m1-cB_1ztz-a2-m2-cB, 1ztz-a2-m2-cA_1ztz-a2-m2-cB
14 1ztz-a2-m2-cA 99 99 0.9255 0.8788 0.8788 1.11e-55 1ztz-a2-m2-cA_1ztz-a2-m2-cB
15 1ztz-a2-m1-cB 99 99 0.9255 0.8788 0.8788 1.11e-55 1ztz-a2-m1-cB_1ztz-a2-m2-cB
16 1ztz-a2-m1-cA 99 99 0.9255 0.8788 0.8788 1.11e-55 1ztz-a2-m1-cA_1ztz-a2-m2-cB
17 3oud-a1-m1-cA 99 99 0.8830 0.8384 0.8384 1.31e-54 3oud-a1-m1-cA_3oud-a1-m1-cB
18 3oud-a1-m1-cB 99 99 0.8723 0.8283 0.8283 5.41e-54 3oud-a1-m1-cA_3oud-a1-m1-cB
19 6ogt-a1-m2-cA 99 99 0.8404 0.7980 0.7980 4.12e-53 6ogt-a1-m1-cA_6ogt-a1-m2-cA
20 6ogt-a1-m1-cA 99 99 0.8404 0.7980 0.7980 4.12e-53 6ogt-a1-m1-cA_6ogt-a1-m2-cA
21 2f80-a2-m4-cB 99 99 0.8936 0.8485 0.8485 4.81e-53 2f80-a2-m1-cA_2f80-a2-m4-cB
22 2f80-a2-m1-cA 99 99 0.8936 0.8485 0.8485 4.81e-53 2f80-a2-m1-cA_2f80-a2-m4-cB
23 2azc-a2-m2-cB 99 99 0.9043 0.8586 0.8586 5.25e-53 2azc-a2-m1-cA_2azc-a2-m2-cB
24 2azc-a2-m2-cA 99 99 0.9043 0.8586 0.8586 5.25e-53 2azc-a2-m1-cA_2azc-a2-m2-cA
25 2azc-a2-m1-cA 99 99 0.9043 0.8586 0.8586 5.25e-53 2azc-a2-m1-cA_2azc-a2-m2-cA, 2azc-a2-m1-cA_2azc-a2-m2-cB
26 2rkg-a1-m1-cB 100 100 0.8191 0.7700 0.7700 1.49e-50 2rkg-a1-m1-cA_2rkg-a1-m1-cB
27 2rkg-a1-m1-cA 100 100 0.8191 0.7700 0.7700 1.49e-50 2rkg-a1-m1-cA_2rkg-a1-m1-cB
28 3u7s-a1-m1-cB 99 99 0.7872 0.7475 0.7475 1.60e-50 3u7s-a1-m1-cA_3u7s-a1-m1-cB
29 3u7s-a1-m1-cA 99 99 0.7872 0.7475 0.7475 1.60e-50 3u7s-a1-m1-cA_3u7s-a1-m1-cB
30 2b7z-a1-m1-cB 99 99 0.8511 0.8081 0.8081 5.00e-50 2b7z-a1-m1-cA_2b7z-a1-m1-cB
31 2b7z-a1-m1-cA 99 99 0.8511 0.8081 0.8081 5.00e-50 2b7z-a1-m1-cA_2b7z-a1-m1-cB
32 3ggu-a1-m1-cB 99 99 0.7872 0.7475 0.7475 8.37e-50 3ggu-a1-m1-cA_3ggu-a1-m1-cB
33 3ggu-a1-m1-cA 99 99 0.7872 0.7475 0.7475 8.37e-50 3ggu-a1-m1-cA_3ggu-a1-m1-cB
34 2p3c-a1-m1-cB 98 99 0.8298 0.7959 0.7879 4.80e-49 2p3c-a1-m1-cA_2p3c-a1-m1-cB
35 2p3c-a1-m1-cA 98 99 0.8298 0.7959 0.7879 4.80e-49 2p3c-a1-m1-cA_2p3c-a1-m1-cB
36 2p3d-a1-m1-cB 99 99 0.7766 0.7374 0.7374 8.95e-49 2p3d-a1-m1-cA_2p3d-a1-m1-cB
37 2p3d-a1-m1-cA 99 99 0.7766 0.7374 0.7374 8.95e-49 2p3d-a1-m1-cA_2p3d-a1-m1-cB
38 8dch-a1-m1-cB 99 99 0.7766 0.7374 0.7374 1.62e-48 8dch-a1-m1-cA_8dch-a1-m1-cB
39 8dch-a1-m1-cA 99 99 0.7766 0.7374 0.7374 1.62e-48 8dch-a1-m1-cA_8dch-a1-m1-cB
40 3ttp-a1-m1-cB 99 99 0.7766 0.7374 0.7374 2.54e-48 3ttp-a1-m1-cA_3ttp-a1-m1-cB
41 3ttp-a1-m1-cA 99 99 0.7766 0.7374 0.7374 2.54e-48 3ttp-a1-m1-cA_3ttp-a1-m1-cB
42 3t3c-a1-m1-cB 99 99 0.7766 0.7374 0.7374 8.68e-48 3t3c-a1-m1-cA_3t3c-a1-m1-cB
43 3t3c-a1-m1-cA 99 99 0.7766 0.7374 0.7374 8.68e-48 3t3c-a1-m1-cA_3t3c-a1-m1-cB
44 6p9a-a1-m1-cB 99 99 0.7660 0.7273 0.7273 1.68e-47 6p9a-a1-m1-cA_6p9a-a1-m1-cB
45 6p9a-a1-m1-cA 99 99 0.7660 0.7273 0.7273 1.68e-47 6p9a-a1-m1-cA_6p9a-a1-m1-cB
46 5b18-a2-m1-cD 99 99 0.7340 0.6970 0.6970 1.94e-44 5b18-a2-m1-cC_5b18-a2-m1-cD
47 5b18-a2-m1-cC 99 99 0.7340 0.6970 0.6970 1.94e-44 5b18-a2-m1-cC_5b18-a2-m1-cD
48 3mws-a1-m1-cB 99 99 0.7234 0.6869 0.6869 4.13e-44 3mws-a1-m1-cA_3mws-a1-m1-cB
49 3mws-a1-m1-cA 99 99 0.7234 0.6869 0.6869 4.13e-44 3mws-a1-m1-cA_3mws-a1-m1-cB
50 2sam-a1-m2-cA 99 99 0.5106 0.4848 0.4848 8.09e-27 2sam-a1-m1-cA_2sam-a1-m2-cA
51 2sam-a1-m1-cA 99 99 0.5106 0.4848 0.4848 8.09e-27 2sam-a1-m1-cA_2sam-a1-m2-cA
52 3nr6-a2-m4-cB 114 88 0.2766 0.2281 0.2955 3.05e-05 3nr6-a2-m2-cB_3nr6-a2-m4-cB, 3nr6-a2-m4-cB_3nr6-a2-m4-cA
53 3nr6-a2-m2-cB 114 88 0.2766 0.2281 0.2955 3.05e-05 3nr6-a2-m2-cB_3nr6-a2-m4-cB
54 3nr6-a2-m4-cA 120 91 0.2766 0.2167 0.2857 2.20e-04 3nr6-a2-m4-cB_3nr6-a2-m4-cA
55 2hah-a1-m2-cA 112 106 0.3511 0.2946 0.3113 0.011 2hah-a1-m1-cA_2hah-a1-m2-cA
56 2hah-a1-m1-cA 112 106 0.3511 0.2946 0.3113 0.011 2hah-a1-m1-cA_2hah-a1-m2-cA
57 1bai-a1-m1-cB 124 89 0.3404 0.2581 0.3596 0.016 1bai-a1-m1-cA_1bai-a1-m1-cB
58 1bai-a1-m1-cA 124 89 0.3404 0.2581 0.3596 0.016 1bai-a1-m1-cA_1bai-a1-m1-cB
59 6fiv-a1-m2-cA 112 44 0.1915 0.1607 0.4091 0.12 6fiv-a1-m1-cA_6fiv-a1-m2-cA
60 6fiv-a1-m1-cA 112 44 0.1915 0.1607 0.4091 0.12 6fiv-a1-m1-cA_6fiv-a1-m2-cA
61 2fmb-a1-m2-cA 104 98 0.2766 0.2500 0.2653 0.16 2fmb-a1-m1-cA_2fmb-a1-m2-cA
62 2fmb-a1-m1-cA 104 98 0.2766 0.2500 0.2653 0.16 2fmb-a1-m1-cA_2fmb-a1-m2-cA
63 5a9s-a1-m1-cA 280 43 0.1915 0.0643 0.4186 0.58 5a9s-a1-m1-cA_5a9s-a1-m1-cB
64 5a9s-a1-m1-cB 282 43 0.1915 0.0638 0.4186 0.61 5a9s-a1-m1-cA_5a9s-a1-m1-cB
65 5nyr-a2-m1-cA 207 29 0.0957 0.0435 0.3103 1.3 5nyr-a2-m3-cB_5nyr-a2-m1-cA
66 4qlo-a2-m2-cA 327 40 0.1277 0.0367 0.3000 3.6 4qlo-a2-m1-cA_4qlo-a2-m2-cA
67 4qlo-a2-m1-cA 327 40 0.1277 0.0367 0.3000 3.6 4qlo-a2-m1-cA_4qlo-a2-m2-cA
68 3f1c-a1-m1-cA 229 29 0.1489 0.0611 0.4828 4.7 3f1c-a1-m1-cA_3f1c-a1-m1-cB
69 3f1c-a1-m1-cB 230 29 0.1489 0.0609 0.4828 4.9 3f1c-a1-m1-cA_3f1c-a1-m1-cB
70 1yta-a2-m1-cD 175 31 0.1383 0.0743 0.4194 9.8 1yta-a2-m1-cC_1yta-a2-m1-cD
71 1yta-a2-m1-cC 175 31 0.1383 0.0743 0.4194 9.8 1yta-a2-m1-cC_1yta-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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