Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYD
QIPVEICGHKAIGTVLVGPTPANIIGRNLLTQIGCTLNF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1mt9-a1-m1-cB 99 99 1.0000 1.0000 1.0000 3.04e-68 1mt9-a1-m1-cA_1mt9-a1-m1-cB
2 1mt9-a1-m1-cA 99 99 1.0000 1.0000 1.0000 3.04e-68 1mt9-a1-m1-cA_1mt9-a1-m1-cB
3 1kj4-a3-m4-cD 99 99 0.9899 0.9899 0.9899 1.53e-67 1kj4-a3-m3-cA_1kj4-a3-m4-cD, 1kj4-a3-m4-cA_1kj4-a3-m4-cD
4 1kj4-a3-m4-cC 99 99 0.9899 0.9899 0.9899 1.53e-67 1kj4-a3-m2-cB_1kj4-a3-m4-cC
5 1kj4-a3-m4-cB 99 99 0.9899 0.9899 0.9899 1.53e-67 1kj4-a3-m2-cB_1kj4-a3-m4-cB
6 1kj4-a3-m4-cA 99 99 0.9899 0.9899 0.9899 1.53e-67 1kj4-a3-m4-cA_1kj4-a3-m4-cD
7 1kj4-a3-m3-cA 99 99 0.9899 0.9899 0.9899 1.53e-67 1kj4-a3-m3-cA_1kj4-a3-m4-cD
8 1kj4-a3-m2-cB 99 99 0.9899 0.9899 0.9899 1.53e-67 1kj4-a3-m2-cB_1kj4-a3-m4-cB, 1kj4-a3-m2-cB_1kj4-a3-m4-cC
9 4mc2-a1-m1-cB 99 99 0.9192 0.9192 0.9192 1.37e-63 4mc2-a1-m1-cA_4mc2-a1-m1-cB
10 4mc2-a1-m1-cA 99 99 0.9192 0.9192 0.9192 1.37e-63 4mc2-a1-m1-cA_4mc2-a1-m1-cB
11 1ztz-a2-m2-cB 99 99 0.9192 0.9192 0.9192 1.37e-63 1ztz-a2-m1-cA_1ztz-a2-m2-cB, 1ztz-a2-m1-cB_1ztz-a2-m2-cB, 1ztz-a2-m2-cA_1ztz-a2-m2-cB
12 1ztz-a2-m2-cA 99 99 0.9192 0.9192 0.9192 1.37e-63 1ztz-a2-m2-cA_1ztz-a2-m2-cB
13 1ztz-a2-m1-cB 99 99 0.9192 0.9192 0.9192 1.37e-63 1ztz-a2-m1-cB_1ztz-a2-m2-cB
14 1ztz-a2-m1-cA 99 99 0.9192 0.9192 0.9192 1.37e-63 1ztz-a2-m1-cA_1ztz-a2-m2-cB
15 3oud-a1-m1-cA 99 99 0.8687 0.8687 0.8687 7.51e-63 3oud-a1-m1-cA_3oud-a1-m1-cB
16 3oud-a1-m1-cB 99 99 0.8586 0.8586 0.8586 3.27e-62 3oud-a1-m1-cA_3oud-a1-m1-cB
17 2f80-a2-m4-cB 99 99 0.8889 0.8889 0.8889 8.15e-61 2f80-a2-m1-cA_2f80-a2-m4-cB
18 2f80-a2-m1-cA 99 99 0.8889 0.8889 0.8889 8.15e-61 2f80-a2-m1-cA_2f80-a2-m4-cB
19 6ogt-a1-m2-cA 99 99 0.8182 0.8182 0.8182 1.24e-60 6ogt-a1-m1-cA_6ogt-a1-m2-cA
20 6ogt-a1-m1-cA 99 99 0.8182 0.8182 0.8182 1.24e-60 6ogt-a1-m1-cA_6ogt-a1-m2-cA
21 3u7s-a1-m1-cB 99 99 0.7677 0.7677 0.7677 4.07e-58 3u7s-a1-m1-cA_3u7s-a1-m1-cB
22 3u7s-a1-m1-cA 99 99 0.7677 0.7677 0.7677 4.07e-58 3u7s-a1-m1-cA_3u7s-a1-m1-cB
23 2azc-a2-m2-cB 99 99 0.9192 0.9192 0.9192 8.96e-58 2azc-a2-m1-cA_2azc-a2-m2-cB
24 2azc-a2-m2-cA 99 99 0.9192 0.9192 0.9192 8.96e-58 2azc-a2-m1-cA_2azc-a2-m2-cA
25 2azc-a2-m1-cA 99 99 0.9192 0.9192 0.9192 8.96e-58 2azc-a2-m1-cA_2azc-a2-m2-cA, 2azc-a2-m1-cA_2azc-a2-m2-cB
26 2rkg-a1-m1-cB 100 100 0.8384 0.8300 0.8300 1.14e-57 2rkg-a1-m1-cA_2rkg-a1-m1-cB
27 2rkg-a1-m1-cA 100 100 0.8384 0.8300 0.8300 1.14e-57 2rkg-a1-m1-cA_2rkg-a1-m1-cB
28 2p3c-a1-m1-cB 98 99 0.8485 0.8571 0.8485 3.10e-57 2p3c-a1-m1-cA_2p3c-a1-m1-cB
29 2p3c-a1-m1-cA 98 99 0.8485 0.8571 0.8485 3.10e-57 2p3c-a1-m1-cA_2p3c-a1-m1-cB
30 1k6c-a1-m1-cA 94 99 0.8889 0.9362 0.8889 4.21e-57 1k6c-a1-m1-cB_1k6c-a1-m1-cA
31 3ggu-a1-m1-cB 99 99 0.7576 0.7576 0.7576 5.92e-57 3ggu-a1-m1-cA_3ggu-a1-m1-cB
32 3ggu-a1-m1-cA 99 99 0.7576 0.7576 0.7576 5.92e-57 3ggu-a1-m1-cA_3ggu-a1-m1-cB
33 3ttp-a1-m1-cB 99 99 0.7778 0.7778 0.7778 1.83e-56 3ttp-a1-m1-cA_3ttp-a1-m1-cB
34 3ttp-a1-m1-cA 99 99 0.7778 0.7778 0.7778 1.83e-56 3ttp-a1-m1-cA_3ttp-a1-m1-cB
35 2p3d-a1-m1-cB 99 99 0.7879 0.7879 0.7879 1.89e-56 2p3d-a1-m1-cA_2p3d-a1-m1-cB
36 2p3d-a1-m1-cA 99 99 0.7879 0.7879 0.7879 1.89e-56 2p3d-a1-m1-cA_2p3d-a1-m1-cB
37 1k6c-a1-m1-cB 93 99 0.8889 0.9462 0.8889 8.08e-56 1k6c-a1-m1-cB_1k6c-a1-m1-cA
38 3t3c-a1-m1-cB 99 99 0.7677 0.7677 0.7677 1.22e-55 3t3c-a1-m1-cA_3t3c-a1-m1-cB
39 3t3c-a1-m1-cA 99 99 0.7677 0.7677 0.7677 1.22e-55 3t3c-a1-m1-cA_3t3c-a1-m1-cB
40 6p9a-a1-m1-cB 99 99 0.7677 0.7677 0.7677 1.58e-55 6p9a-a1-m1-cA_6p9a-a1-m1-cB
41 6p9a-a1-m1-cA 99 99 0.7677 0.7677 0.7677 1.58e-55 6p9a-a1-m1-cA_6p9a-a1-m1-cB
42 2b7z-a1-m1-cB 99 99 0.8586 0.8586 0.8586 1.97e-54 2b7z-a1-m1-cA_2b7z-a1-m1-cB
43 2b7z-a1-m1-cA 99 99 0.8586 0.8586 0.8586 1.97e-54 2b7z-a1-m1-cA_2b7z-a1-m1-cB
44 8dch-a1-m1-cB 99 99 0.7273 0.7273 0.7273 1.16e-53 8dch-a1-m1-cA_8dch-a1-m1-cB
45 8dch-a1-m1-cA 99 99 0.7273 0.7273 0.7273 1.16e-53 8dch-a1-m1-cA_8dch-a1-m1-cB
46 3mws-a1-m1-cB 99 99 0.7475 0.7475 0.7475 6.45e-53 3mws-a1-m1-cA_3mws-a1-m1-cB
47 3mws-a1-m1-cA 99 99 0.7475 0.7475 0.7475 6.45e-53 3mws-a1-m1-cA_3mws-a1-m1-cB
48 5b18-a2-m1-cD 99 99 0.7576 0.7576 0.7576 9.51e-50 5b18-a2-m1-cC_5b18-a2-m1-cD
49 5b18-a2-m1-cC 99 99 0.7576 0.7576 0.7576 9.51e-50 5b18-a2-m1-cC_5b18-a2-m1-cD
50 2sam-a1-m2-cA 99 99 0.5051 0.5051 0.5051 1.88e-32 2sam-a1-m1-cA_2sam-a1-m2-cA
51 2sam-a1-m1-cA 99 99 0.5051 0.5051 0.5051 1.88e-32 2sam-a1-m1-cA_2sam-a1-m2-cA
52 1bai-a1-m1-cB 124 90 0.3636 0.2903 0.4000 5.72e-07 1bai-a1-m1-cA_1bai-a1-m1-cB
53 1bai-a1-m1-cA 124 90 0.3636 0.2903 0.4000 5.72e-07 1bai-a1-m1-cA_1bai-a1-m1-cB
54 3nr6-a2-m4-cB 114 93 0.2626 0.2281 0.2796 0.002 3nr6-a2-m2-cB_3nr6-a2-m4-cB, 3nr6-a2-m4-cB_3nr6-a2-m4-cA
55 3nr6-a2-m2-cB 114 93 0.2626 0.2281 0.2796 0.002 3nr6-a2-m2-cB_3nr6-a2-m4-cB
56 3nr6-a2-m4-cA 120 93 0.2626 0.2167 0.2796 0.004 3nr6-a2-m4-cB_3nr6-a2-m4-cA
57 2hah-a1-m2-cA 112 106 0.3939 0.3482 0.3679 0.023 2hah-a1-m1-cA_2hah-a1-m2-cA
58 2hah-a1-m1-cA 112 106 0.3939 0.3482 0.3679 0.023 2hah-a1-m1-cA_2hah-a1-m2-cA
59 6s1w-a1-m1-cA 97 92 0.2222 0.2268 0.2391 0.042 6s1w-a1-m1-cA_6s1w-a1-m1-cB
60 6s1w-a1-m1-cB 108 94 0.2323 0.2130 0.2447 0.059 6s1w-a1-m1-cA_6s1w-a1-m1-cB
61 7bgt-a1-m1-cB 108 96 0.2525 0.2315 0.2604 0.069 7bgt-a1-m1-cA_7bgt-a1-m1-cB
62 7bgt-a1-m1-cA 108 96 0.2525 0.2315 0.2604 0.069 7bgt-a1-m1-cA_7bgt-a1-m1-cB
63 6fiv-a1-m2-cA 112 68 0.2424 0.2143 0.3529 0.073 6fiv-a1-m1-cA_6fiv-a1-m2-cA
64 6fiv-a1-m1-cA 112 68 0.2424 0.2143 0.3529 0.073 6fiv-a1-m1-cA_6fiv-a1-m2-cA
65 2fmb-a1-m2-cA 104 99 0.2828 0.2692 0.2828 0.48 2fmb-a1-m1-cA_2fmb-a1-m2-cA
66 2fmb-a1-m1-cA 104 99 0.2828 0.2692 0.2828 0.48 2fmb-a1-m1-cA_2fmb-a1-m2-cA
67 3f1c-a1-m1-cB 230 30 0.1414 0.0609 0.4667 1.0 3f1c-a1-m1-cA_3f1c-a1-m1-cB
68 3f1c-a1-m1-cA 229 30 0.1414 0.0611 0.4667 1.1 3f1c-a1-m1-cA_3f1c-a1-m1-cB
69 2rsp-a1-m1-cA 115 29 0.1212 0.1043 0.4138 3.2 2rsp-a1-m1-cB_2rsp-a1-m1-cA
70 6el1-a1-m1-cT 332 72 0.2222 0.0663 0.3056 3.9 6el1-a1-m1-cS_6el1-a1-m1-cT
71 6el1-a1-m1-cS 332 72 0.2222 0.0663 0.3056 3.9 6el1-a1-m1-cS_6el1-a1-m1-cT
72 2rsp-a1-m1-cB 113 27 0.1313 0.1150 0.4815 4.5 2rsp-a1-m1-cB_2rsp-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600