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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
PQITLWQRPIVTIKIGGQLKEALLNTGADDTVLEEVNLPGRWKPKLIGGIGGFVKVRQYD
QVPIEICGHKVIGTVLVGPTPTNVIGRNLMTQIGCTLNF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3oud-a1-m1-cA 99 99 1.0000 1.0000 1.0000 1.63e-67 3oud-a1-m1-cA_3oud-a1-m1-cB
2 3oud-a1-m1-cB 99 99 0.9899 0.9899 0.9899 6.22e-67 3oud-a1-m1-cA_3oud-a1-m1-cB
3 1mt9-a1-m1-cB 99 99 0.8687 0.8687 0.8687 7.51e-63 1mt9-a1-m1-cA_1mt9-a1-m1-cB
4 1mt9-a1-m1-cA 99 99 0.8687 0.8687 0.8687 7.51e-63 1mt9-a1-m1-cA_1mt9-a1-m1-cB
5 1kj4-a3-m4-cD 99 99 0.8687 0.8687 0.8687 1.27e-62 1kj4-a3-m3-cA_1kj4-a3-m4-cD, 1kj4-a3-m4-cA_1kj4-a3-m4-cD
6 1kj4-a3-m4-cC 99 99 0.8687 0.8687 0.8687 1.27e-62 1kj4-a3-m2-cB_1kj4-a3-m4-cC
7 1kj4-a3-m4-cB 99 99 0.8687 0.8687 0.8687 1.27e-62 1kj4-a3-m2-cB_1kj4-a3-m4-cB
8 1kj4-a3-m4-cA 99 99 0.8687 0.8687 0.8687 1.27e-62 1kj4-a3-m4-cA_1kj4-a3-m4-cD
9 1kj4-a3-m3-cA 99 99 0.8687 0.8687 0.8687 1.27e-62 1kj4-a3-m3-cA_1kj4-a3-m4-cD
10 1kj4-a3-m2-cB 99 99 0.8687 0.8687 0.8687 1.27e-62 1kj4-a3-m2-cB_1kj4-a3-m4-cB, 1kj4-a3-m2-cB_1kj4-a3-m4-cC
11 6ogt-a1-m2-cA 99 99 0.8586 0.8586 0.8586 7.20e-62 6ogt-a1-m1-cA_6ogt-a1-m2-cA
12 6ogt-a1-m1-cA 99 99 0.8586 0.8586 0.8586 7.20e-62 6ogt-a1-m1-cA_6ogt-a1-m2-cA
13 3ggu-a1-m1-cB 99 99 0.8788 0.8788 0.8788 6.69e-61 3ggu-a1-m1-cA_3ggu-a1-m1-cB
14 3ggu-a1-m1-cA 99 99 0.8788 0.8788 0.8788 6.69e-61 3ggu-a1-m1-cA_3ggu-a1-m1-cB
15 4mc2-a1-m1-cB 99 99 0.8586 0.8586 0.8586 7.63e-61 4mc2-a1-m1-cA_4mc2-a1-m1-cB
16 4mc2-a1-m1-cA 99 99 0.8586 0.8586 0.8586 7.63e-61 4mc2-a1-m1-cA_4mc2-a1-m1-cB
17 1ztz-a2-m2-cB 99 99 0.8586 0.8586 0.8586 7.63e-61 1ztz-a2-m1-cA_1ztz-a2-m2-cB, 1ztz-a2-m1-cB_1ztz-a2-m2-cB, 1ztz-a2-m2-cA_1ztz-a2-m2-cB
18 1ztz-a2-m2-cA 99 99 0.8586 0.8586 0.8586 7.63e-61 1ztz-a2-m2-cA_1ztz-a2-m2-cB
19 1ztz-a2-m1-cB 99 99 0.8586 0.8586 0.8586 7.63e-61 1ztz-a2-m1-cB_1ztz-a2-m2-cB
20 1ztz-a2-m1-cA 99 99 0.8586 0.8586 0.8586 7.63e-61 1ztz-a2-m1-cA_1ztz-a2-m2-cB
21 3u7s-a1-m1-cB 99 99 0.8182 0.8182 0.8182 3.80e-59 3u7s-a1-m1-cA_3u7s-a1-m1-cB
22 3u7s-a1-m1-cA 99 99 0.8182 0.8182 0.8182 3.80e-59 3u7s-a1-m1-cA_3u7s-a1-m1-cB
23 2f80-a2-m4-cB 99 99 0.8283 0.8283 0.8283 3.81e-58 2f80-a2-m1-cA_2f80-a2-m4-cB
24 2f80-a2-m1-cA 99 99 0.8283 0.8283 0.8283 3.81e-58 2f80-a2-m1-cA_2f80-a2-m4-cB
25 2rkg-a1-m1-cB 100 100 0.8182 0.8100 0.8100 4.35e-57 2rkg-a1-m1-cA_2rkg-a1-m1-cB
26 2rkg-a1-m1-cA 100 100 0.8182 0.8100 0.8100 4.35e-57 2rkg-a1-m1-cA_2rkg-a1-m1-cB
27 3ttp-a1-m1-cB 99 99 0.7778 0.7778 0.7778 1.66e-56 3ttp-a1-m1-cA_3ttp-a1-m1-cB
28 3ttp-a1-m1-cA 99 99 0.7778 0.7778 0.7778 1.66e-56 3ttp-a1-m1-cA_3ttp-a1-m1-cB
29 6p9a-a1-m1-cB 99 99 0.7980 0.7980 0.7980 3.70e-56 6p9a-a1-m1-cA_6p9a-a1-m1-cB
30 6p9a-a1-m1-cA 99 99 0.7980 0.7980 0.7980 3.70e-56 6p9a-a1-m1-cA_6p9a-a1-m1-cB
31 2b7z-a1-m1-cB 99 99 0.8889 0.8889 0.8889 3.87e-56 2b7z-a1-m1-cA_2b7z-a1-m1-cB
32 2b7z-a1-m1-cA 99 99 0.8889 0.8889 0.8889 3.87e-56 2b7z-a1-m1-cA_2b7z-a1-m1-cB
33 2azc-a2-m2-cB 99 99 0.8586 0.8586 0.8586 2.98e-55 2azc-a2-m1-cA_2azc-a2-m2-cB
34 2azc-a2-m2-cA 99 99 0.8586 0.8586 0.8586 2.98e-55 2azc-a2-m1-cA_2azc-a2-m2-cA
35 2azc-a2-m1-cA 99 99 0.8586 0.8586 0.8586 2.98e-55 2azc-a2-m1-cA_2azc-a2-m2-cA, 2azc-a2-m1-cA_2azc-a2-m2-cB
36 8dch-a1-m1-cB 99 99 0.7677 0.7677 0.7677 5.33e-55 8dch-a1-m1-cA_8dch-a1-m1-cB
37 8dch-a1-m1-cA 99 99 0.7677 0.7677 0.7677 5.33e-55 8dch-a1-m1-cA_8dch-a1-m1-cB
38 2p3c-a1-m1-cB 98 99 0.7879 0.7959 0.7879 6.02e-55 2p3c-a1-m1-cA_2p3c-a1-m1-cB
39 2p3c-a1-m1-cA 98 99 0.7879 0.7959 0.7879 6.02e-55 2p3c-a1-m1-cA_2p3c-a1-m1-cB
40 2p3d-a1-m1-cB 99 99 0.7576 0.7576 0.7576 7.17e-55 2p3d-a1-m1-cA_2p3d-a1-m1-cB
41 2p3d-a1-m1-cA 99 99 0.7576 0.7576 0.7576 7.17e-55 2p3d-a1-m1-cA_2p3d-a1-m1-cB
42 3t3c-a1-m1-cB 99 99 0.7576 0.7576 0.7576 1.01e-54 3t3c-a1-m1-cA_3t3c-a1-m1-cB
43 3t3c-a1-m1-cA 99 99 0.7576 0.7576 0.7576 1.01e-54 3t3c-a1-m1-cA_3t3c-a1-m1-cB
44 1k6c-a1-m1-cA 94 99 0.8384 0.8830 0.8384 1.38e-54 1k6c-a1-m1-cB_1k6c-a1-m1-cA
45 1k6c-a1-m1-cB 93 99 0.8283 0.8817 0.8283 2.06e-53 1k6c-a1-m1-cB_1k6c-a1-m1-cA
46 3mws-a1-m1-cB 99 99 0.7273 0.7273 0.7273 4.16e-52 3mws-a1-m1-cA_3mws-a1-m1-cB
47 3mws-a1-m1-cA 99 99 0.7273 0.7273 0.7273 4.16e-52 3mws-a1-m1-cA_3mws-a1-m1-cB
48 5b18-a2-m1-cD 99 99 0.8081 0.8081 0.8081 1.12e-51 5b18-a2-m1-cC_5b18-a2-m1-cD
49 5b18-a2-m1-cC 99 99 0.8081 0.8081 0.8081 1.12e-51 5b18-a2-m1-cC_5b18-a2-m1-cD
50 2sam-a1-m2-cA 99 99 0.4848 0.4848 0.4848 1.04e-32 2sam-a1-m1-cA_2sam-a1-m2-cA
51 2sam-a1-m1-cA 99 99 0.4848 0.4848 0.4848 1.04e-32 2sam-a1-m1-cA_2sam-a1-m2-cA
52 1bai-a1-m1-cB 124 90 0.3333 0.2661 0.3667 9.91e-06 1bai-a1-m1-cA_1bai-a1-m1-cB
53 1bai-a1-m1-cA 124 90 0.3333 0.2661 0.3667 9.91e-06 1bai-a1-m1-cA_1bai-a1-m1-cB
54 3nr6-a2-m4-cB 114 93 0.2626 0.2281 0.2796 0.001 3nr6-a2-m2-cB_3nr6-a2-m4-cB, 3nr6-a2-m4-cB_3nr6-a2-m4-cA
55 3nr6-a2-m2-cB 114 93 0.2626 0.2281 0.2796 0.001 3nr6-a2-m2-cB_3nr6-a2-m4-cB
56 3nr6-a2-m4-cA 120 93 0.2626 0.2167 0.2796 0.003 3nr6-a2-m4-cB_3nr6-a2-m4-cA
57 6s1w-a1-m1-cA 97 92 0.2222 0.2268 0.2391 0.019 6s1w-a1-m1-cA_6s1w-a1-m1-cB
58 6s1w-a1-m1-cB 108 94 0.2222 0.2037 0.2340 0.033 6s1w-a1-m1-cA_6s1w-a1-m1-cB
59 7bgt-a1-m1-cB 108 98 0.2222 0.2037 0.2245 0.039 7bgt-a1-m1-cA_7bgt-a1-m1-cB
60 7bgt-a1-m1-cA 108 98 0.2222 0.2037 0.2245 0.039 7bgt-a1-m1-cA_7bgt-a1-m1-cB
61 2hah-a1-m2-cA 112 106 0.3636 0.3214 0.3396 0.12 2hah-a1-m1-cA_2hah-a1-m2-cA
62 2hah-a1-m1-cA 112 106 0.3636 0.3214 0.3396 0.12 2hah-a1-m1-cA_2hah-a1-m2-cA
63 2fmb-a1-m2-cA 104 99 0.2828 0.2692 0.2828 0.31 2fmb-a1-m1-cA_2fmb-a1-m2-cA
64 2fmb-a1-m1-cA 104 99 0.2828 0.2692 0.2828 0.31 2fmb-a1-m1-cA_2fmb-a1-m2-cA
65 6fiv-a1-m2-cA 112 68 0.2222 0.1964 0.3235 1.2 6fiv-a1-m1-cA_6fiv-a1-m2-cA
66 6fiv-a1-m1-cA 112 68 0.2222 0.1964 0.3235 1.2 6fiv-a1-m1-cA_6fiv-a1-m2-cA
67 5lds-a3-m3-cD 898 50 0.1717 0.0189 0.3400 4.1 5lds-a3-m3-cD_5lds-a3-m1-cC
68 5lds-a3-m1-cC 899 50 0.1717 0.0189 0.3400 4.1 5lds-a3-m3-cD_5lds-a3-m1-cC
69 2rsp-a1-m1-cA 115 29 0.1212 0.1043 0.4138 7.1 2rsp-a1-m1-cB_2rsp-a1-m1-cA
70 2rsp-a1-m1-cB 113 21 0.1010 0.0885 0.4762 7.6 2rsp-a1-m1-cB_2rsp-a1-m1-cA
71 3f1c-a1-m1-cA 229 30 0.1313 0.0568 0.4333 7.9 3f1c-a1-m1-cA_3f1c-a1-m1-cB
72 3f1c-a1-m1-cB 230 30 0.1313 0.0565 0.4333 8.0 3f1c-a1-m1-cA_3f1c-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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