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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
PQITLWQRPLVTVKIGGQLREALLDTGADDTIFEDINLPGKWTPKMVGGIGGFMKVRQYD
QVVIEICGHKVTSPVLVGPTPLNIIGRNVLTQLGCTLNF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ttp-a1-m1-cB 99 99 1.0000 1.0000 1.0000 1.23e-68 3ttp-a1-m1-cA_3ttp-a1-m1-cB
2 3ttp-a1-m1-cA 99 99 1.0000 1.0000 1.0000 1.23e-68 3ttp-a1-m1-cA_3ttp-a1-m1-cB
3 3u7s-a1-m1-cB 99 99 0.8384 0.8384 0.8384 5.50e-60 3u7s-a1-m1-cA_3u7s-a1-m1-cB
4 3u7s-a1-m1-cA 99 99 0.8384 0.8384 0.8384 5.50e-60 3u7s-a1-m1-cA_3u7s-a1-m1-cB
5 6ogt-a1-m2-cA 99 99 0.7980 0.7980 0.7980 1.62e-58 6ogt-a1-m1-cA_6ogt-a1-m2-cA
6 6ogt-a1-m1-cA 99 99 0.7980 0.7980 0.7980 1.62e-58 6ogt-a1-m1-cA_6ogt-a1-m2-cA
7 4mc2-a1-m1-cB 99 99 0.7879 0.7879 0.7879 9.79e-58 4mc2-a1-m1-cA_4mc2-a1-m1-cB
8 4mc2-a1-m1-cA 99 99 0.7879 0.7879 0.7879 9.79e-58 4mc2-a1-m1-cA_4mc2-a1-m1-cB
9 1ztz-a2-m2-cB 99 99 0.7879 0.7879 0.7879 9.79e-58 1ztz-a2-m1-cA_1ztz-a2-m2-cB, 1ztz-a2-m1-cB_1ztz-a2-m2-cB, 1ztz-a2-m2-cA_1ztz-a2-m2-cB
10 1ztz-a2-m2-cA 99 99 0.7879 0.7879 0.7879 9.79e-58 1ztz-a2-m2-cA_1ztz-a2-m2-cB
11 1ztz-a2-m1-cB 99 99 0.7879 0.7879 0.7879 9.79e-58 1ztz-a2-m1-cB_1ztz-a2-m2-cB
12 1ztz-a2-m1-cA 99 99 0.7879 0.7879 0.7879 9.79e-58 1ztz-a2-m1-cA_1ztz-a2-m2-cB
13 1kj4-a3-m4-cD 99 99 0.7778 0.7778 0.7778 1.14e-56 1kj4-a3-m3-cA_1kj4-a3-m4-cD, 1kj4-a3-m4-cA_1kj4-a3-m4-cD
14 1kj4-a3-m4-cC 99 99 0.7778 0.7778 0.7778 1.14e-56 1kj4-a3-m2-cB_1kj4-a3-m4-cC
15 1kj4-a3-m4-cB 99 99 0.7778 0.7778 0.7778 1.14e-56 1kj4-a3-m2-cB_1kj4-a3-m4-cB
16 1kj4-a3-m4-cA 99 99 0.7778 0.7778 0.7778 1.14e-56 1kj4-a3-m4-cA_1kj4-a3-m4-cD
17 1kj4-a3-m3-cA 99 99 0.7778 0.7778 0.7778 1.14e-56 1kj4-a3-m3-cA_1kj4-a3-m4-cD
18 1kj4-a3-m2-cB 99 99 0.7778 0.7778 0.7778 1.14e-56 1kj4-a3-m2-cB_1kj4-a3-m4-cB, 1kj4-a3-m2-cB_1kj4-a3-m4-cC
19 3oud-a1-m1-cA 99 99 0.7778 0.7778 0.7778 1.66e-56 3oud-a1-m1-cA_3oud-a1-m1-cB
20 1mt9-a1-m1-cB 99 99 0.7778 0.7778 0.7778 1.83e-56 1mt9-a1-m1-cA_1mt9-a1-m1-cB
21 1mt9-a1-m1-cA 99 99 0.7778 0.7778 0.7778 1.83e-56 1mt9-a1-m1-cA_1mt9-a1-m1-cB
22 2rkg-a1-m1-cB 100 100 0.8182 0.8100 0.8100 4.45e-56 2rkg-a1-m1-cA_2rkg-a1-m1-cB
23 2rkg-a1-m1-cA 100 100 0.8182 0.8100 0.8100 4.45e-56 2rkg-a1-m1-cA_2rkg-a1-m1-cB
24 3oud-a1-m1-cB 99 99 0.7778 0.7778 0.7778 5.43e-56 3oud-a1-m1-cA_3oud-a1-m1-cB
25 3ggu-a1-m1-cB 99 99 0.7778 0.7778 0.7778 1.80e-55 3ggu-a1-m1-cA_3ggu-a1-m1-cB
26 3ggu-a1-m1-cA 99 99 0.7778 0.7778 0.7778 1.80e-55 3ggu-a1-m1-cA_3ggu-a1-m1-cB
27 2f80-a2-m4-cB 99 99 0.7576 0.7576 0.7576 3.36e-55 2f80-a2-m1-cA_2f80-a2-m4-cB
28 2f80-a2-m1-cA 99 99 0.7576 0.7576 0.7576 3.36e-55 2f80-a2-m1-cA_2f80-a2-m4-cB
29 3t3c-a1-m1-cB 99 99 0.7273 0.7273 0.7273 1.10e-53 3t3c-a1-m1-cA_3t3c-a1-m1-cB
30 3t3c-a1-m1-cA 99 99 0.7273 0.7273 0.7273 1.10e-53 3t3c-a1-m1-cA_3t3c-a1-m1-cB
31 2p3d-a1-m1-cB 99 99 0.7374 0.7374 0.7374 1.20e-53 2p3d-a1-m1-cA_2p3d-a1-m1-cB
32 2p3d-a1-m1-cA 99 99 0.7374 0.7374 0.7374 1.20e-53 2p3d-a1-m1-cA_2p3d-a1-m1-cB
33 2p3c-a1-m1-cB 98 99 0.7677 0.7755 0.7677 3.69e-53 2p3c-a1-m1-cA_2p3c-a1-m1-cB
34 2p3c-a1-m1-cA 98 99 0.7677 0.7755 0.7677 3.69e-53 2p3c-a1-m1-cA_2p3c-a1-m1-cB
35 6p9a-a1-m1-cB 99 99 0.7071 0.7071 0.7071 1.33e-52 6p9a-a1-m1-cA_6p9a-a1-m1-cB
36 6p9a-a1-m1-cA 99 99 0.7071 0.7071 0.7071 1.33e-52 6p9a-a1-m1-cA_6p9a-a1-m1-cB
37 8dch-a1-m1-cB 99 99 0.7475 0.7475 0.7475 3.90e-52 8dch-a1-m1-cA_8dch-a1-m1-cB
38 8dch-a1-m1-cA 99 99 0.7475 0.7475 0.7475 3.90e-52 8dch-a1-m1-cA_8dch-a1-m1-cB
39 2b7z-a1-m1-cB 99 99 0.8182 0.8182 0.8182 1.35e-51 2b7z-a1-m1-cA_2b7z-a1-m1-cB
40 2b7z-a1-m1-cA 99 99 0.8182 0.8182 0.8182 1.35e-51 2b7z-a1-m1-cA_2b7z-a1-m1-cB
41 3mws-a1-m1-cB 99 99 0.7374 0.7374 0.7374 1.24e-50 3mws-a1-m1-cA_3mws-a1-m1-cB
42 3mws-a1-m1-cA 99 99 0.7374 0.7374 0.7374 1.24e-50 3mws-a1-m1-cA_3mws-a1-m1-cB
43 2azc-a2-m2-cB 99 99 0.7576 0.7576 0.7576 3.39e-49 2azc-a2-m1-cA_2azc-a2-m2-cB
44 2azc-a2-m2-cA 99 99 0.7576 0.7576 0.7576 3.39e-49 2azc-a2-m1-cA_2azc-a2-m2-cA
45 2azc-a2-m1-cA 99 99 0.7576 0.7576 0.7576 3.39e-49 2azc-a2-m1-cA_2azc-a2-m2-cA, 2azc-a2-m1-cA_2azc-a2-m2-cB
46 1k6c-a1-m1-cA 94 99 0.7374 0.7766 0.7374 2.67e-48 1k6c-a1-m1-cB_1k6c-a1-m1-cA
47 5b18-a2-m1-cD 99 99 0.7576 0.7576 0.7576 2.95e-48 5b18-a2-m1-cC_5b18-a2-m1-cD
48 5b18-a2-m1-cC 99 99 0.7576 0.7576 0.7576 2.95e-48 5b18-a2-m1-cC_5b18-a2-m1-cD
49 1k6c-a1-m1-cB 93 99 0.7475 0.7957 0.7475 1.45e-47 1k6c-a1-m1-cB_1k6c-a1-m1-cA
50 2sam-a1-m2-cA 99 99 0.5354 0.5354 0.5354 1.33e-33 2sam-a1-m1-cA_2sam-a1-m2-cA
51 2sam-a1-m1-cA 99 99 0.5354 0.5354 0.5354 1.33e-33 2sam-a1-m1-cA_2sam-a1-m2-cA
52 1bai-a1-m1-cB 124 89 0.3434 0.2742 0.3820 4.63e-07 1bai-a1-m1-cA_1bai-a1-m1-cB
53 1bai-a1-m1-cA 124 89 0.3434 0.2742 0.3820 4.63e-07 1bai-a1-m1-cA_1bai-a1-m1-cB
54 3nr6-a2-m4-cA 120 93 0.2828 0.2333 0.3011 0.001 3nr6-a2-m4-cB_3nr6-a2-m4-cA
55 3nr6-a2-m4-cB 114 93 0.2727 0.2368 0.2903 0.002 3nr6-a2-m2-cB_3nr6-a2-m4-cB, 3nr6-a2-m4-cB_3nr6-a2-m4-cA
56 3nr6-a2-m2-cB 114 93 0.2727 0.2368 0.2903 0.002 3nr6-a2-m2-cB_3nr6-a2-m4-cB
57 6s1w-a1-m1-cB 108 94 0.2424 0.2222 0.2553 0.003 6s1w-a1-m1-cA_6s1w-a1-m1-cB
58 7bgt-a1-m1-cB 108 98 0.2424 0.2222 0.2449 0.003 7bgt-a1-m1-cA_7bgt-a1-m1-cB
59 7bgt-a1-m1-cA 108 98 0.2424 0.2222 0.2449 0.003 7bgt-a1-m1-cA_7bgt-a1-m1-cB
60 2fmb-a1-m2-cA 104 99 0.2929 0.2788 0.2929 0.017 2fmb-a1-m1-cA_2fmb-a1-m2-cA
61 2fmb-a1-m1-cA 104 99 0.2929 0.2788 0.2929 0.017 2fmb-a1-m1-cA_2fmb-a1-m2-cA
62 6s1w-a1-m1-cA 97 89 0.2121 0.2165 0.2360 0.023 6s1w-a1-m1-cA_6s1w-a1-m1-cB
63 2hah-a1-m2-cA 112 106 0.3333 0.2946 0.3113 0.038 2hah-a1-m1-cA_2hah-a1-m2-cA
64 2hah-a1-m1-cA 112 106 0.3333 0.2946 0.3113 0.038 2hah-a1-m1-cA_2hah-a1-m2-cA
65 6fiv-a1-m2-cA 112 80 0.2525 0.2232 0.3125 0.17 6fiv-a1-m1-cA_6fiv-a1-m2-cA
66 6fiv-a1-m1-cA 112 80 0.2525 0.2232 0.3125 0.17 6fiv-a1-m1-cA_6fiv-a1-m2-cA
67 2rsp-a1-m1-cA 115 80 0.2525 0.2174 0.3125 0.20 2rsp-a1-m1-cB_2rsp-a1-m1-cA
68 2rsp-a1-m1-cB 113 80 0.2626 0.2301 0.3250 1.4 2rsp-a1-m1-cB_2rsp-a1-m1-cA
69 5a9s-a1-m1-cA 280 57 0.1818 0.0643 0.3158 2.2 5a9s-a1-m1-cA_5a9s-a1-m1-cB
70 5a9s-a1-m1-cB 282 57 0.1818 0.0638 0.3158 2.3 5a9s-a1-m1-cA_5a9s-a1-m1-cB
71 6u1v-a1-m1-cB 389 49 0.1818 0.0463 0.3673 4.4 6u1v-a1-m1-cD_6u1v-a1-m1-cB
72 6u1v-a1-m1-cC 383 49 0.1818 0.0470 0.3673 4.6 6u1v-a1-m1-cD_6u1v-a1-m1-cC
73 6u1v-a1-m1-cD 382 49 0.1818 0.0471 0.3673 4.8 6u1v-a1-m1-cD_6u1v-a1-m1-cB, 6u1v-a1-m1-cD_6u1v-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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