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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
PQITLWQRPLVVVKVGGQLMEALLDTGADDTIFEEMNLPGRWTPKMIGGIGGFLNVRQYD
QVPIEICGHKVVSTVLIGPTPLNVIGRNVMTQIGCTLNF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3u7s-a1-m1-cB 99 99 1.0000 1.0000 1.0000 7.53e-69 3u7s-a1-m1-cA_3u7s-a1-m1-cB
2 3u7s-a1-m1-cA 99 99 1.0000 1.0000 1.0000 7.53e-69 3u7s-a1-m1-cA_3u7s-a1-m1-cB
3 3ttp-a1-m1-cB 99 99 0.8384 0.8384 0.8384 5.50e-60 3ttp-a1-m1-cA_3ttp-a1-m1-cB
4 3ttp-a1-m1-cA 99 99 0.8384 0.8384 0.8384 5.50e-60 3ttp-a1-m1-cA_3ttp-a1-m1-cB
5 6ogt-a1-m2-cA 99 99 0.8081 0.8081 0.8081 1.51e-59 6ogt-a1-m1-cA_6ogt-a1-m2-cA
6 6ogt-a1-m1-cA 99 99 0.8081 0.8081 0.8081 1.51e-59 6ogt-a1-m1-cA_6ogt-a1-m2-cA
7 3oud-a1-m1-cA 99 99 0.8182 0.8182 0.8182 3.80e-59 3oud-a1-m1-cA_3oud-a1-m1-cB
8 3oud-a1-m1-cB 99 99 0.8182 0.8182 0.8182 9.98e-59 3oud-a1-m1-cA_3oud-a1-m1-cB
9 3ggu-a1-m1-cB 99 99 0.8081 0.8081 0.8081 3.19e-58 3ggu-a1-m1-cA_3ggu-a1-m1-cB
10 3ggu-a1-m1-cA 99 99 0.8081 0.8081 0.8081 3.19e-58 3ggu-a1-m1-cA_3ggu-a1-m1-cB
11 1kj4-a3-m4-cD 99 99 0.7677 0.7677 0.7677 3.23e-58 1kj4-a3-m3-cA_1kj4-a3-m4-cD, 1kj4-a3-m4-cA_1kj4-a3-m4-cD
12 1kj4-a3-m4-cC 99 99 0.7677 0.7677 0.7677 3.23e-58 1kj4-a3-m2-cB_1kj4-a3-m4-cC
13 1kj4-a3-m4-cB 99 99 0.7677 0.7677 0.7677 3.23e-58 1kj4-a3-m2-cB_1kj4-a3-m4-cB
14 1kj4-a3-m4-cA 99 99 0.7677 0.7677 0.7677 3.23e-58 1kj4-a3-m4-cA_1kj4-a3-m4-cD
15 1kj4-a3-m3-cA 99 99 0.7677 0.7677 0.7677 3.23e-58 1kj4-a3-m3-cA_1kj4-a3-m4-cD
16 1kj4-a3-m2-cB 99 99 0.7677 0.7677 0.7677 3.23e-58 1kj4-a3-m2-cB_1kj4-a3-m4-cB, 1kj4-a3-m2-cB_1kj4-a3-m4-cC
17 1mt9-a1-m1-cB 99 99 0.7677 0.7677 0.7677 4.07e-58 1mt9-a1-m1-cA_1mt9-a1-m1-cB
18 1mt9-a1-m1-cA 99 99 0.7677 0.7677 0.7677 4.07e-58 1mt9-a1-m1-cA_1mt9-a1-m1-cB
19 4mc2-a1-m1-cB 99 99 0.7879 0.7879 0.7879 5.65e-58 4mc2-a1-m1-cA_4mc2-a1-m1-cB
20 4mc2-a1-m1-cA 99 99 0.7879 0.7879 0.7879 5.65e-58 4mc2-a1-m1-cA_4mc2-a1-m1-cB
21 1ztz-a2-m2-cB 99 99 0.7879 0.7879 0.7879 5.65e-58 1ztz-a2-m1-cA_1ztz-a2-m2-cB, 1ztz-a2-m1-cB_1ztz-a2-m2-cB, 1ztz-a2-m2-cA_1ztz-a2-m2-cB
22 1ztz-a2-m2-cA 99 99 0.7879 0.7879 0.7879 5.65e-58 1ztz-a2-m2-cA_1ztz-a2-m2-cB
23 1ztz-a2-m1-cB 99 99 0.7879 0.7879 0.7879 5.65e-58 1ztz-a2-m1-cB_1ztz-a2-m2-cB
24 1ztz-a2-m1-cA 99 99 0.7879 0.7879 0.7879 5.65e-58 1ztz-a2-m1-cA_1ztz-a2-m2-cB
25 2rkg-a1-m1-cB 100 100 0.7980 0.7900 0.7900 6.24e-57 2rkg-a1-m1-cA_2rkg-a1-m1-cB
26 2rkg-a1-m1-cA 100 100 0.7980 0.7900 0.7900 6.24e-57 2rkg-a1-m1-cA_2rkg-a1-m1-cB
27 2f80-a2-m4-cB 99 99 0.7576 0.7576 0.7576 2.39e-55 2f80-a2-m1-cA_2f80-a2-m4-cB
28 2f80-a2-m1-cA 99 99 0.7576 0.7576 0.7576 2.39e-55 2f80-a2-m1-cA_2f80-a2-m4-cB
29 8dch-a1-m1-cB 99 99 0.7475 0.7475 0.7475 1.65e-53 8dch-a1-m1-cA_8dch-a1-m1-cB
30 8dch-a1-m1-cA 99 99 0.7475 0.7475 0.7475 1.65e-53 8dch-a1-m1-cA_8dch-a1-m1-cB
31 2b7z-a1-m1-cB 99 99 0.8384 0.8384 0.8384 1.82e-53 2b7z-a1-m1-cA_2b7z-a1-m1-cB
32 2b7z-a1-m1-cA 99 99 0.8384 0.8384 0.8384 1.82e-53 2b7z-a1-m1-cA_2b7z-a1-m1-cB
33 3t3c-a1-m1-cB 99 99 0.6970 0.6970 0.6970 1.03e-52 3t3c-a1-m1-cA_3t3c-a1-m1-cB
34 3t3c-a1-m1-cA 99 99 0.6970 0.6970 0.6970 1.03e-52 3t3c-a1-m1-cA_3t3c-a1-m1-cB
35 2azc-a2-m2-cB 99 99 0.7879 0.7879 0.7879 5.48e-52 2azc-a2-m1-cA_2azc-a2-m2-cB
36 2azc-a2-m2-cA 99 99 0.7879 0.7879 0.7879 5.48e-52 2azc-a2-m1-cA_2azc-a2-m2-cA
37 2azc-a2-m1-cA 99 99 0.7879 0.7879 0.7879 5.48e-52 2azc-a2-m1-cA_2azc-a2-m2-cA, 2azc-a2-m1-cA_2azc-a2-m2-cB
38 6p9a-a1-m1-cB 99 99 0.6768 0.6768 0.6768 7.28e-52 6p9a-a1-m1-cA_6p9a-a1-m1-cB
39 6p9a-a1-m1-cA 99 99 0.6768 0.6768 0.6768 7.28e-52 6p9a-a1-m1-cA_6p9a-a1-m1-cB
40 2p3c-a1-m1-cB 98 99 0.7273 0.7347 0.7273 1.38e-51 2p3c-a1-m1-cA_2p3c-a1-m1-cB
41 2p3c-a1-m1-cA 98 99 0.7273 0.7347 0.7273 1.38e-51 2p3c-a1-m1-cA_2p3c-a1-m1-cB
42 5b18-a2-m1-cD 99 99 0.7677 0.7677 0.7677 1.83e-51 5b18-a2-m1-cC_5b18-a2-m1-cD
43 5b18-a2-m1-cC 99 99 0.7677 0.7677 0.7677 1.83e-51 5b18-a2-m1-cC_5b18-a2-m1-cD
44 1k6c-a1-m1-cA 94 99 0.7475 0.7872 0.7475 1.68e-50 1k6c-a1-m1-cB_1k6c-a1-m1-cA
45 2p3d-a1-m1-cB 99 99 0.6869 0.6869 0.6869 3.21e-50 2p3d-a1-m1-cA_2p3d-a1-m1-cB
46 2p3d-a1-m1-cA 99 99 0.6869 0.6869 0.6869 3.21e-50 2p3d-a1-m1-cA_2p3d-a1-m1-cB
47 1k6c-a1-m1-cB 93 99 0.7576 0.8065 0.7576 8.84e-50 1k6c-a1-m1-cB_1k6c-a1-m1-cA
48 3mws-a1-m1-cB 99 99 0.6970 0.6970 0.6970 3.96e-49 3mws-a1-m1-cA_3mws-a1-m1-cB
49 3mws-a1-m1-cA 99 99 0.6970 0.6970 0.6970 3.96e-49 3mws-a1-m1-cA_3mws-a1-m1-cB
50 2sam-a1-m2-cA 99 99 0.4848 0.4848 0.4848 2.59e-33 2sam-a1-m1-cA_2sam-a1-m2-cA
51 2sam-a1-m1-cA 99 99 0.4848 0.4848 0.4848 2.59e-33 2sam-a1-m1-cA_2sam-a1-m2-cA
52 1bai-a1-m1-cB 124 98 0.3333 0.2661 0.3367 4.60e-06 1bai-a1-m1-cA_1bai-a1-m1-cB
53 1bai-a1-m1-cA 124 98 0.3333 0.2661 0.3367 4.60e-06 1bai-a1-m1-cA_1bai-a1-m1-cB
54 2fmb-a1-m2-cA 104 99 0.2626 0.2500 0.2626 3.21e-04 2fmb-a1-m1-cA_2fmb-a1-m2-cA
55 2fmb-a1-m1-cA 104 99 0.2626 0.2500 0.2626 3.21e-04 2fmb-a1-m1-cA_2fmb-a1-m2-cA
56 2hah-a1-m2-cA 112 106 0.3434 0.3036 0.3208 0.001 2hah-a1-m1-cA_2hah-a1-m2-cA
57 2hah-a1-m1-cA 112 106 0.3434 0.3036 0.3208 0.001 2hah-a1-m1-cA_2hah-a1-m2-cA
58 3nr6-a2-m4-cB 114 93 0.2323 0.2018 0.2473 0.006 3nr6-a2-m2-cB_3nr6-a2-m4-cB, 3nr6-a2-m4-cB_3nr6-a2-m4-cA
59 3nr6-a2-m2-cB 114 93 0.2323 0.2018 0.2473 0.006 3nr6-a2-m2-cB_3nr6-a2-m4-cB
60 3nr6-a2-m4-cA 120 96 0.2222 0.1833 0.2292 0.013 3nr6-a2-m4-cB_3nr6-a2-m4-cA
61 6s1w-a1-m1-cB 108 96 0.2626 0.2407 0.2708 0.014 6s1w-a1-m1-cA_6s1w-a1-m1-cB
62 7bgt-a1-m1-cB 108 96 0.2626 0.2407 0.2708 0.014 7bgt-a1-m1-cA_7bgt-a1-m1-cB
63 7bgt-a1-m1-cA 108 96 0.2626 0.2407 0.2708 0.014 7bgt-a1-m1-cA_7bgt-a1-m1-cB
64 6fiv-a1-m2-cA 112 80 0.2727 0.2411 0.3375 0.015 6fiv-a1-m1-cA_6fiv-a1-m2-cA
65 6fiv-a1-m1-cA 112 80 0.2727 0.2411 0.3375 0.015 6fiv-a1-m1-cA_6fiv-a1-m2-cA
66 6s1w-a1-m1-cA 97 89 0.2020 0.2062 0.2247 0.062 6s1w-a1-m1-cA_6s1w-a1-m1-cB
67 2rsp-a1-m1-cA 115 38 0.1616 0.1391 0.4211 0.95 2rsp-a1-m1-cB_2rsp-a1-m1-cA
68 2rsp-a1-m1-cB 113 30 0.1414 0.1239 0.4667 1.1 2rsp-a1-m1-cB_2rsp-a1-m1-cA
69 6u1v-a1-m1-cB 389 36 0.1414 0.0360 0.3889 8.3 6u1v-a1-m1-cD_6u1v-a1-m1-cB
70 6u1v-a1-m1-cC 383 36 0.1414 0.0366 0.3889 9.2 6u1v-a1-m1-cD_6u1v-a1-m1-cC
71 6u1v-a1-m1-cD 382 36 0.1414 0.0366 0.3889 9.4 6u1v-a1-m1-cD_6u1v-a1-m1-cB, 6u1v-a1-m1-cD_6u1v-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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