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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
PQIVFTATALRDLERLREFLRSKNPPAAQRAASAIINTIRKLESYPDIGRSFRELLIDFG
DTGYLAYQYERLTVLCIRHQK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7etr-a1-m1-cC 81 81 1.0000 1.0000 1.0000 1.07e-55 7etr-a1-m1-cD_7etr-a1-m1-cC
2 7etr-a1-m1-cD 71 81 0.8765 1.0000 0.8765 3.68e-41 7etr-a1-m1-cD_7etr-a1-m1-cC
3 5ud1-a1-m1-cB 278 50 0.2593 0.0755 0.4200 0.032 5ud1-a1-m1-cA_5ud1-a1-m1-cB
4 5ud1-a1-m1-cA 278 50 0.2593 0.0755 0.4200 0.032 5ud1-a1-m1-cA_5ud1-a1-m1-cB
5 4myz-a3-m2-cB 52 46 0.1728 0.2692 0.3043 0.29 4myz-a3-m2-cA_4myz-a3-m2-cB
6 3al6-a1-m1-cA 299 45 0.1728 0.0468 0.3111 2.8 3al6-a1-m1-cA_3al6-a1-m1-cB
7 3al6-a2-m1-cD 308 45 0.1728 0.0455 0.3111 2.8 3al6-a2-m1-cC_3al6-a2-m1-cD
8 3al6-a1-m1-cB 308 45 0.1728 0.0455 0.3111 2.8 3al6-a1-m1-cA_3al6-a1-m1-cB
9 5ean-a1-m2-cA 1051 35 0.1481 0.0114 0.3429 3.3 5ean-a1-m1-cA_5ean-a1-m2-cA
10 5ean-a1-m1-cA 1051 35 0.1481 0.0114 0.3429 3.3 5ean-a1-m1-cA_5ean-a1-m2-cA
11 3al6-a2-m1-cC 273 45 0.1728 0.0513 0.3111 6.9 3al6-a2-m1-cC_3al6-a2-m1-cD
12 3i5a-a1-m4-cA 319 62 0.2222 0.0564 0.2903 9.2 3i5a-a1-m1-cA_3i5a-a1-m4-cA, 3i5a-a1-m2-cA_3i5a-a1-m4-cA, 3i5a-a1-m3-cA_3i5a-a1-m4-cA
13 3i5a-a1-m3-cA 319 62 0.2222 0.0564 0.2903 9.2 3i5a-a1-m3-cA_3i5a-a1-m4-cA
14 3i5a-a1-m2-cA 319 62 0.2222 0.0564 0.2903 9.2 3i5a-a1-m2-cA_3i5a-a1-m4-cA
15 3i5a-a1-m1-cA 319 62 0.2222 0.0564 0.2903 9.2 3i5a-a1-m1-cA_3i5a-a1-m4-cA

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Reference:
Jacob Schwartz et al.

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