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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
PQIVFTATALRDLERLREFPPAAQRAASAIINTIRKLESYPDISFRELLIDFGDTGYLAY
QLTVLCIRHQK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7etr-a1-m1-cD 71 71 1.0000 1.0000 1.0000 9.02e-48 7etr-a1-m1-cD_7etr-a1-m1-cC
2 7etr-a1-m1-cC 81 81 1.0000 0.8765 0.8765 3.23e-41 7etr-a1-m1-cD_7etr-a1-m1-cC
3 5k8b-a2-m1-cD 394 50 0.2394 0.0431 0.3400 3.8 5k8b-a2-m1-cC_5k8b-a2-m1-cD
4 5k8b-a2-m1-cC 394 50 0.2394 0.0431 0.3400 3.8 5k8b-a2-m1-cC_5k8b-a2-m1-cD
5 5ean-a1-m2-cA 1051 25 0.1549 0.0105 0.4400 4.6 5ean-a1-m1-cA_5ean-a1-m2-cA
6 5ean-a1-m1-cA 1051 25 0.1549 0.0105 0.4400 4.6 5ean-a1-m1-cA_5ean-a1-m2-cA
7 3pco-a1-m1-cC 323 21 0.1408 0.0310 0.4762 7.0 3pco-a1-m1-cA_3pco-a1-m1-cC
8 6bmf-a1-m1-cD 285 21 0.1127 0.0281 0.3810 8.7 6bmf-a1-m1-cC_6bmf-a1-m1-cD
9 6bmf-a1-m1-cC 285 21 0.1127 0.0281 0.3810 8.7 6bmf-a1-m1-cC_6bmf-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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