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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
PQKICLICGDEASGCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRNDCIVDKIRRKNCPAC
RLRKCCQAGMVLGGRK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2c7a-a1-m1-cB 76 76 1.0000 1.0000 1.0000 2.67e-51 2c7a-a1-m1-cB_2c7a-a1-m1-cA
2 2c7a-a1-m1-cA 78 76 1.0000 0.9744 1.0000 2.89e-51 2c7a-a1-m1-cB_2c7a-a1-m1-cA
3 1r4i-a1-m1-cA 74 74 0.7632 0.7838 0.7838 8.40e-40 1r4i-a1-m1-cB_1r4i-a1-m1-cA
4 1r4i-a1-m1-cB 71 71 0.7368 0.7887 0.7887 1.32e-37 1r4i-a1-m1-cB_1r4i-a1-m1-cA
5 1hcq-a2-m1-cE 74 69 0.4868 0.5000 0.5362 6.50e-24 1hcq-a2-m1-cF_1hcq-a2-m1-cE
6 4oln-a1-m1-cA 70 71 0.5132 0.5571 0.5493 1.45e-23 4oln-a1-m1-cB_4oln-a1-m1-cA
7 8ifo-a1-m1-cB 80 74 0.5000 0.4750 0.5135 3.50e-23 8ifo-a1-m1-cA_8ifo-a1-m1-cB
8 4oln-a1-m1-cB 67 70 0.4868 0.5522 0.5286 3.45e-22 4oln-a1-m1-cB_4oln-a1-m1-cA
9 8ifo-a1-m1-cA 76 73 0.4868 0.4868 0.5068 6.48e-22 8ifo-a1-m1-cA_8ifo-a1-m1-cB
10 1hcq-a2-m1-cF 71 69 0.4868 0.5211 0.5362 1.02e-21 1hcq-a2-m1-cF_1hcq-a2-m1-cE
11 7xv6-a1-m1-cA 84 70 0.4211 0.3810 0.4571 7.97e-18 7xv6-a1-m1-cB_7xv6-a1-m1-cA
12 7xv9-a1-m1-cB 80 70 0.4211 0.4000 0.4571 8.11e-18 7xv9-a1-m1-cA_7xv9-a1-m1-cB
13 7xv9-a1-m1-cA 80 70 0.4211 0.4000 0.4571 8.11e-18 7xv9-a1-m1-cA_7xv9-a1-m1-cB
14 7xv6-a1-m1-cB 77 70 0.4211 0.4156 0.4571 8.19e-18 7xv6-a1-m1-cB_7xv6-a1-m1-cA
15 6fbq-a1-m1-cB 81 70 0.4342 0.4074 0.4714 2.06e-17 6fbq-a1-m1-cA_6fbq-a1-m1-cB
16 6fbq-a1-m1-cA 80 70 0.4342 0.4125 0.4714 2.10e-17 6fbq-a1-m1-cA_6fbq-a1-m1-cB
17 6l6l-a1-m1-cA 85 68 0.4342 0.3882 0.4853 1.19e-16 6l6l-a1-m1-cB_6l6l-a1-m1-cA
18 6l6l-a1-m1-cB 84 68 0.4342 0.3929 0.4853 1.24e-16 6l6l-a1-m1-cB_6l6l-a1-m1-cA
19 4ag6-a1-m1-cD 188 27 0.1711 0.0691 0.4815 0.27 4ag6-a1-m1-cD_4ag6-a1-m1-cA
20 4ag6-a1-m1-cA 367 23 0.1579 0.0327 0.5217 5.1 4ag6-a1-m1-cD_4ag6-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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