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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
PQKTCLICGDEASGAHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPSC
RLRKCYEAGMTLGA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1r4i-a1-m1-cA 74 74 1.0000 1.0000 1.0000 2.74e-50 1r4i-a1-m1-cB_1r4i-a1-m1-cA
2 1r4i-a1-m1-cB 71 71 0.9595 1.0000 1.0000 1.23e-47 1r4i-a1-m1-cB_1r4i-a1-m1-cA
3 2c7a-a1-m1-cB 76 74 0.7838 0.7632 0.7838 8.18e-40 2c7a-a1-m1-cB_2c7a-a1-m1-cA
4 2c7a-a1-m1-cA 78 74 0.7838 0.7436 0.7838 9.99e-40 2c7a-a1-m1-cB_2c7a-a1-m1-cA
5 1hcq-a2-m1-cE 74 68 0.5270 0.5270 0.5735 5.62e-25 1hcq-a2-m1-cF_1hcq-a2-m1-cE
6 4oln-a1-m1-cA 70 71 0.5405 0.5714 0.5634 2.03e-24 4oln-a1-m1-cB_4oln-a1-m1-cA
7 4oln-a1-m1-cB 67 70 0.5405 0.5970 0.5714 9.32e-24 4oln-a1-m1-cB_4oln-a1-m1-cA
8 1hcq-a2-m1-cF 71 68 0.5270 0.5493 0.5735 5.25e-23 1hcq-a2-m1-cF_1hcq-a2-m1-cE
9 8ifo-a1-m1-cB 80 70 0.4865 0.4500 0.5143 4.20e-22 8ifo-a1-m1-cA_8ifo-a1-m1-cB
10 8ifo-a1-m1-cA 76 69 0.4730 0.4605 0.5072 6.67e-21 8ifo-a1-m1-cA_8ifo-a1-m1-cB
11 7xv6-a1-m1-cB 77 68 0.4730 0.4545 0.5147 1.61e-20 7xv6-a1-m1-cB_7xv6-a1-m1-cA
12 7xv9-a1-m1-cB 80 68 0.4730 0.4375 0.5147 1.61e-20 7xv9-a1-m1-cA_7xv9-a1-m1-cB
13 7xv9-a1-m1-cA 80 68 0.4730 0.4375 0.5147 1.61e-20 7xv9-a1-m1-cA_7xv9-a1-m1-cB
14 7xv6-a1-m1-cA 84 68 0.4730 0.4167 0.5147 2.07e-20 7xv6-a1-m1-cB_7xv6-a1-m1-cA
15 6l6l-a1-m1-cA 85 67 0.4189 0.3647 0.4627 4.75e-17 6l6l-a1-m1-cB_6l6l-a1-m1-cA
16 6l6l-a1-m1-cB 84 67 0.4189 0.3690 0.4627 4.84e-17 6l6l-a1-m1-cB_6l6l-a1-m1-cA
17 6fbq-a1-m1-cB 81 74 0.4459 0.4074 0.4459 2.29e-16 6fbq-a1-m1-cA_6fbq-a1-m1-cB
18 6fbq-a1-m1-cA 80 74 0.4459 0.4125 0.4459 2.41e-16 6fbq-a1-m1-cA_6fbq-a1-m1-cB
19 4ag6-a1-m1-cD 188 27 0.1757 0.0691 0.4815 0.73 4ag6-a1-m1-cD_4ag6-a1-m1-cA
20 2q1w-a2-m2-cA 300 24 0.1216 0.0300 0.3750 3.3 2q1w-a2-m1-cA_2q1w-a2-m2-cA
21 2q1w-a2-m1-cA 300 24 0.1216 0.0300 0.3750 3.3 2q1w-a2-m1-cA_2q1w-a2-m2-cA
22 4ag6-a1-m1-cA 367 22 0.1622 0.0327 0.5455 5.9 4ag6-a1-m1-cD_4ag6-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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