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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
PQNYLFGCELKADKDYHFKVNEHQLSLRTVSLGALHIVEAEAMNYEGSPIKVTLATLKMS
VQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8as5-a1-m1-cE 97 97 1.0000 1.0000 1.0000 1.19e-68 8as5-a1-m1-cA_8as5-a1-m1-cE
2 8as5-a1-m1-cA 87 94 0.8866 0.9885 0.9149 2.55e-52 8as5-a1-m1-cA_8as5-a1-m1-cE
3 1xe0-a2-m1-cJ 104 103 0.8144 0.7596 0.7670 5.59e-50 1xe0-a2-m1-cJ_1xe0-a2-m1-cI
4 1xe0-a2-m1-cI 105 104 0.8144 0.7524 0.7596 7.92e-50 1xe0-a2-m1-cJ_1xe0-a2-m1-cI
5 1k5j-a1-m1-cC 89 97 0.4536 0.4944 0.4536 1.47e-20 1k5j-a1-m1-cC_1k5j-a1-m1-cD
6 1k5j-a1-m1-cD 90 97 0.4742 0.5111 0.4742 1.57e-20 1k5j-a1-m1-cC_1k5j-a1-m1-cD
7 3t30-a2-m1-cI 92 89 0.3608 0.3804 0.3933 1.41e-13 3t30-a2-m1-cI_3t30-a2-m1-cH
8 3t30-a2-m1-cH 93 94 0.3711 0.3871 0.3830 1.81e-12 3t30-a2-m1-cI_3t30-a2-m1-cH
9 1nlq-a1-m1-cC 96 100 0.2680 0.2708 0.2600 1.0 1nlq-a1-m1-cC_1nlq-a1-m1-cE
10 1nlq-a1-m1-cE 98 102 0.2887 0.2857 0.2745 2.4 1nlq-a1-m1-cC_1nlq-a1-m1-cE
11 6cqo-a1-m1-cA 93 34 0.1546 0.1613 0.4412 5.1 6cqo-a1-m1-cG_6cqo-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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