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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=29)
PQQARQALQCLFINFCAILICLLLICIIG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4kyt-a3-m1-cB 29 29 1.0000 1.0000 1.0000 3.24e-13 4kyt-a3-m1-cC_4kyt-a3-m1-cB
2 4kyt-a3-m1-cC 15 15 0.5172 1.0000 1.0000 0.002 4kyt-a3-m1-cC_4kyt-a3-m1-cB
3 2hyn-a1-m1-cE 52 16 0.4828 0.2692 0.8750 0.003 2hyn-a1-m1-cD_2hyn-a1-m1-cE
4 2hyn-a1-m1-cD 52 16 0.4828 0.2692 0.8750 0.003 2hyn-a1-m1-cD_2hyn-a1-m1-cE
5 2kyv-a1-m1-cE 52 16 0.4828 0.2692 0.8750 0.005 2kyv-a1-m1-cD_2kyv-a1-m1-cE
6 2kyv-a1-m1-cD 52 16 0.4828 0.2692 0.8750 0.005 2kyv-a1-m1-cD_2kyv-a1-m1-cE
7 2m3b-a1-m1-cE 51 16 0.4828 0.2745 0.8750 0.005 2m3b-a1-m1-cD_2m3b-a1-m1-cE
8 2m3b-a1-m1-cD 51 16 0.4828 0.2745 0.8750 0.005 2m3b-a1-m1-cD_2m3b-a1-m1-cE
9 1yod-a1-m2-cA 29 20 0.4483 0.4483 0.6500 0.11 1yod-a1-m2-cB_1yod-a1-m2-cA
10 1yod-a1-m1-cA 29 20 0.4483 0.4483 0.6500 0.11 1yod-a1-m2-cB_1yod-a1-m1-cA
11 3fzq-a2-m1-cB 251 21 0.2414 0.0279 0.3333 7.5 3fzq-a2-m1-cB_3fzq-a2-m1-cA
12 3fzq-a2-m1-cA 265 21 0.2414 0.0264 0.3333 8.7 3fzq-a2-m1-cB_3fzq-a2-m1-cA

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Reference:
Jacob Schwartz et al.

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