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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
PQRREVAKRKIRRLRQGGSVIDYSNAFQIAQDLDWNEPALIDQYHEGLSDHIQEELSHLE
VAKSLSALIGQCIHIERRLARAAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7lga-a2-m1-cE 84 84 1.0000 1.0000 1.0000 3.08e-57 7lga-a2-m1-cE_7lga-a2-m1-cD
2 7lga-a2-m1-cD 89 83 0.9881 0.9326 1.0000 5.34e-56 7lga-a2-m1-cE_7lga-a2-m1-cD
3 5vn6-a1-m1-cA 273 39 0.1548 0.0476 0.3333 0.13 5vn6-a1-m1-cB_5vn6-a1-m1-cA
4 5vn6-a1-m1-cB 268 39 0.1548 0.0485 0.3333 0.14 5vn6-a1-m1-cB_5vn6-a1-m1-cA
5 3pdm-a1-m9-cP 162 29 0.1310 0.0679 0.3793 1.5 3pdm-a1-m8-cP_3pdm-a1-m9-cP
6 3pdm-a1-m8-cP 162 29 0.1310 0.0679 0.3793 1.5 3pdm-a1-m24-cP_3pdm-a1-m8-cP, 3pdm-a1-m8-cP_3pdm-a1-m9-cP
7 3pdm-a1-m24-cP 162 29 0.1310 0.0679 0.3793 1.5 3pdm-a1-m24-cP_3pdm-a1-m8-cP
8 3tp9-a1-m1-cB 465 44 0.1429 0.0258 0.2727 5.0 3tp9-a1-m1-cB_3tp9-a1-m1-cA
9 3tp9-a1-m1-cA 466 44 0.1429 0.0258 0.2727 5.0 3tp9-a1-m1-cB_3tp9-a1-m1-cA
10 5tro-a1-m1-cA 490 68 0.2381 0.0408 0.2941 5.2 5tro-a1-m1-cA_5tro-a1-m1-cB
11 5tro-a1-m1-cB 491 68 0.2381 0.0407 0.2941 5.3 5tro-a1-m1-cA_5tro-a1-m1-cB
12 6zjc-a2-m1-cD 220 38 0.1667 0.0636 0.3684 8.2 6zjc-a2-m1-cC_6zjc-a2-m1-cD
13 6zjc-a2-m1-cC 220 38 0.1667 0.0636 0.3684 8.2 6zjc-a2-m1-cC_6zjc-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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