Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=87)
PQVLRGSGHCKWFNVRMGFGFISMTSREGSPLENPVDVFVHQSKLYMEGFRSLKEGEPVE
FTFKKSSKGFESLRVTGPGGNPCLGNE

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 3ulj-a3-m2-cA 87 87 1.0000 1.0000 1.0000 3.00e-60 3ulj-a3-m2-cA_3ulj-a3-m2-cB
2 3ulj-a3-m1-cA 87 87 1.0000 1.0000 1.0000 3.00e-60 3ulj-a3-m1-cA_3ulj-a3-m2-cB
3 4alp-a1-m2-cB 86 86 0.9885 1.0000 1.0000 2.30e-59 4alp-a1-m4-cD_4alp-a1-m2-cB
4 3ulj-a3-m2-cB 89 87 0.9885 0.9663 0.9885 8.64e-58 3ulj-a3-m1-cA_3ulj-a3-m2-cB, 3ulj-a3-m2-cA_3ulj-a3-m2-cB
5 4alp-a1-m4-cD 84 84 0.9655 1.0000 1.0000 9.56e-58 4alp-a1-m4-cD_4alp-a1-m2-cB
6 7f3i-a1-m1-cA 93 82 0.4023 0.3763 0.4268 4.08e-14 7f3i-a1-m1-cE_7f3i-a1-m1-cA
7 7f3i-a1-m1-cE 91 82 0.4023 0.3846 0.4268 4.24e-14 7f3i-a1-m1-cE_7f3i-a1-m1-cA
8 3i2z-a1-m1-cB 67 70 0.3333 0.4328 0.4143 3.83e-11 3i2z-a1-m1-cB_3i2z-a1-m1-cA
9 3i2z-a1-m1-cA 71 70 0.3333 0.4085 0.4143 4.03e-11 3i2z-a1-m1-cB_3i2z-a1-m1-cA
10 2i5m-a2-m2-cX 66 70 0.3103 0.4091 0.3857 5.69e-10 2i5m-a2-m1-cX_2i5m-a2-m2-cX
11 2i5m-a2-m1-cX 66 70 0.3103 0.4091 0.3857 5.69e-10 2i5m-a2-m1-cX_2i5m-a2-m2-cX
12 1hzb-a1-m1-cB 66 69 0.2874 0.3788 0.3623 1.83e-08 1hzb-a1-m1-cA_1hzb-a1-m1-cB
13 1hzb-a1-m1-cA 66 69 0.2874 0.3788 0.3623 1.83e-08 1hzb-a1-m1-cA_1hzb-a1-m1-cB
14 2hax-a1-m1-cB 66 69 0.2874 0.3788 0.3623 1.99e-08 2hax-a1-m1-cA_2hax-a1-m1-cB
15 2hax-a1-m1-cA 66 69 0.2874 0.3788 0.3623 1.99e-08 2hax-a1-m1-cA_2hax-a1-m1-cB
16 1c9o-a1-m1-cB 66 69 0.2874 0.3788 0.3623 1.99e-08 1c9o-a1-m1-cA_1c9o-a1-m1-cB
17 1c9o-a1-m1-cA 66 69 0.2874 0.3788 0.3623 1.99e-08 1c9o-a1-m1-cA_1c9o-a1-m1-cB
18 3cam-a1-m1-cB 65 69 0.3103 0.4154 0.3913 5.71e-08 3cam-a1-m1-cA_3cam-a1-m1-cB
19 3cam-a1-m1-cA 65 69 0.3103 0.4154 0.3913 5.71e-08 3cam-a1-m1-cA_3cam-a1-m1-cB
20 5jx4-a1-m1-cB 66 69 0.2759 0.3636 0.3478 1.31e-06 5jx4-a1-m1-cA_5jx4-a1-m1-cB
21 5jx4-a1-m1-cA 65 69 0.2759 0.3692 0.3478 1.49e-06 5jx4-a1-m1-cA_5jx4-a1-m1-cB
22 2bh8-a1-m2-cB 86 35 0.1839 0.1860 0.4571 0.013 2bh8-a1-m1-cA_2bh8-a1-m2-cB, 2bh8-a1-m1-cB_2bh8-a1-m2-cB, 2bh8-a1-m2-cA_2bh8-a1-m2-cB
23 2bh8-a1-m1-cB 86 35 0.1839 0.1860 0.4571 0.013 2bh8-a1-m1-cB_2bh8-a1-m2-cB
24 2bh8-a1-m2-cA 85 37 0.1954 0.2000 0.4595 0.014 2bh8-a1-m2-cA_2bh8-a1-m2-cB
25 2bh8-a1-m1-cA 85 37 0.1954 0.2000 0.4595 0.014 2bh8-a1-m1-cA_2bh8-a1-m2-cB
26 1ykd-a1-m1-cA 383 40 0.1264 0.0287 0.2750 7.8 1ykd-a1-m1-cB_1ykd-a1-m1-cA
27 1ykd-a1-m1-cB 380 40 0.1264 0.0289 0.2750 7.9 1ykd-a1-m1-cB_1ykd-a1-m1-cA
28 6ebn-a1-m1-cB 957 24 0.1379 0.0125 0.5000 9.8 6ebn-a1-m1-cB_6ebn-a1-m1-cA
29 6ebn-a1-m1-cA 960 24 0.1379 0.0125 0.5000 9.9 6ebn-a1-m1-cB_6ebn-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600