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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
PRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3kup-a1-m1-cB 62 59 1.0000 0.9516 1.0000 2.81e-39 3kup-a1-m1-cA_3kup-a1-m1-cB
2 3kup-a1-m1-cA 59 59 1.0000 1.0000 1.0000 3.13e-39 3kup-a1-m1-cA_3kup-a1-m1-cB
3 2fmm-a1-m2-cC 67 59 0.8983 0.7910 0.8983 6.22e-36 2fmm-a1-m2-cC_2fmm-a1-m2-cA, 2fmm-a1-m2-cD_2fmm-a1-m2-cC
4 2fmm-a1-m2-cD 66 59 0.8983 0.8030 0.8983 6.90e-36 2fmm-a1-m2-cD_2fmm-a1-m2-cA, 2fmm-a1-m2-cD_2fmm-a1-m2-cC
5 2fmm-a1-m2-cA 68 59 0.8983 0.7794 0.8983 6.97e-36 2fmm-a1-m2-cC_2fmm-a1-m2-cA, 2fmm-a1-m2-cD_2fmm-a1-m2-cA
6 3p7j-a2-m2-cA 59 57 0.5085 0.5085 0.5263 3.63e-17 3p7j-a2-m2-cA_3p7j-a2-m1-cB
7 3p7j-a1-m1-cA 59 57 0.5085 0.5085 0.5263 3.63e-17 3p7j-a1-m1-cA_3p7j-a1-m1-cB
8 3p7j-a2-m1-cB 61 57 0.5085 0.4918 0.5263 7.20e-17 3p7j-a2-m2-cA_3p7j-a2-m1-cB
9 3p7j-a1-m1-cB 61 57 0.5085 0.4918 0.5263 7.20e-17 3p7j-a1-m1-cA_3p7j-a1-m1-cB
10 3dm1-a5-m1-cC 52 44 0.2203 0.2500 0.2955 5.92e-04 3dm1-a5-m1-cC_3dm1-a5-m1-cE, 3dm1-a5-m1-cC_3dm1-a5-m1-cG
11 3dm1-a5-m1-cA 52 44 0.2203 0.2500 0.2955 5.92e-04 3dm1-a5-m1-cA_3dm1-a5-m1-cG
12 3dm1-a5-m1-cG 53 44 0.2203 0.2453 0.2955 6.04e-04 3dm1-a5-m1-cA_3dm1-a5-m1-cG, 3dm1-a5-m1-cC_3dm1-a5-m1-cG, 3dm1-a5-m1-cE_3dm1-a5-m1-cG
13 3dm1-a5-m1-cE 53 44 0.2203 0.2453 0.2955 6.04e-04 3dm1-a5-m1-cC_3dm1-a5-m1-cE, 3dm1-a5-m1-cE_3dm1-a5-m1-cG
14 5xyv-a1-m1-cA 63 57 0.2542 0.2381 0.2632 0.003 5xyv-a1-m1-cA_5xyv-a1-m1-cB
15 5xyv-a1-m1-cB 64 57 0.2542 0.2344 0.2632 0.003 5xyv-a1-m1-cA_5xyv-a1-m1-cB
16 3f2u-a1-m2-cA 51 44 0.2034 0.2353 0.2727 0.007 3f2u-a1-m1-cA_3f2u-a1-m2-cA
17 3f2u-a1-m1-cA 51 44 0.2034 0.2353 0.2727 0.007 3f2u-a1-m1-cA_3f2u-a1-m2-cA
18 5xyw-a1-m1-cA 54 54 0.2542 0.2778 0.2778 1.1 5xyw-a1-m1-cB_5xyw-a1-m1-cA
19 3fm5-a3-m1-cD 135 38 0.2203 0.0963 0.3421 1.4 3fm5-a3-m1-cC_3fm5-a3-m1-cD, 3fm5-a3-m1-cD_3fm5-a3-m1-cB
20 3fm5-a3-m1-cB 137 38 0.2203 0.0949 0.3421 3.3 3fm5-a3-m1-cC_3fm5-a3-m1-cB, 3fm5-a3-m1-cD_3fm5-a3-m1-cB
21 3h91-a3-m2-cB 52 44 0.2034 0.2308 0.2727 4.3 3h91-a3-m1-cB_3h91-a3-m2-cB
22 3h91-a3-m1-cB 52 44 0.2034 0.2308 0.2727 4.3 3h91-a3-m1-cB_3h91-a3-m2-cB
23 2ori-a1-m1-cB 216 51 0.2373 0.0648 0.2745 9.9 2ori-a1-m1-cA_2ori-a1-m1-cB
24 2ori-a1-m1-cA 216 51 0.2373 0.0648 0.2745 9.9 2ori-a1-m1-cA_2ori-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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