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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=57)
PRIVRVKRFEMKPMDPEEAAFQMEALGHSFFVFRNAKTDEINVIYRRKDGNYGLIEP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6gzz-a1-m1-cX3 57 57 1.0000 1.0000 1.0000 1.07e-37 6gzz-a1-m1-cW4_6gzz-a1-m1-cX3
2 6gzz-a1-m1-cW4 57 57 1.0000 1.0000 1.0000 1.07e-37 6gzz-a1-m1-cW4_6gzz-a1-m1-cX3
3 6gzx-a1-m1-cX3 57 57 1.0000 1.0000 1.0000 1.07e-37 6gzx-a1-m1-cW4_6gzx-a1-m1-cX3
4 6gzx-a1-m1-cW4 57 57 1.0000 1.0000 1.0000 1.07e-37 6gzx-a1-m1-cW4_6gzx-a1-m1-cX3
5 6t7o-a1-m1-cA 59 55 0.5614 0.5424 0.5818 1.35e-20 6t7o-a1-m1-cB_6t7o-a1-m1-cA
6 6fxc-a1-m1-cBv 162 55 0.5614 0.1975 0.5818 2.40e-19 6fxc-a1-m1-cAv_6fxc-a1-m1-cBv
7 6fxc-a1-m1-cAv 162 55 0.5614 0.1975 0.5818 2.40e-19 6fxc-a1-m1-cAv_6fxc-a1-m1-cBv
8 6t7o-a1-m1-cB 58 55 0.5439 0.5345 0.5636 4.24e-18 6t7o-a1-m1-cB_6t7o-a1-m1-cA
9 3ka5-a1-m1-cA 55 55 0.5965 0.6182 0.6182 1.22e-15 3ka5-a1-m1-cA_3ka5-a1-m1-cB
10 3ka5-a1-m1-cB 57 55 0.5965 0.5965 0.6182 1.36e-15 3ka5-a1-m1-cA_3ka5-a1-m1-cB
11 3lyv-a4-m1-cB 56 56 0.4737 0.4821 0.4821 5.49e-13 3lyv-a4-m1-cB_3lyv-a4-m3-cA
12 3lyv-a4-m3-cA 57 56 0.4737 0.4737 0.4821 5.87e-13 3lyv-a4-m1-cB_3lyv-a4-m3-cA
13 4co9-a2-m1-cB 207 54 0.2632 0.0725 0.2778 1.0 4co9-a2-m1-cA_4co9-a2-m1-cB
14 4co9-a2-m1-cA 207 54 0.2632 0.0725 0.2778 1.0 4co9-a2-m1-cA_4co9-a2-m1-cB
15 2f9h-a1-m1-cA 119 26 0.1754 0.0840 0.3846 1.8 2f9h-a1-m1-cB_2f9h-a1-m1-cA
16 2f9h-a1-m1-cB 117 26 0.1754 0.0855 0.3846 1.9 2f9h-a1-m1-cB_2f9h-a1-m1-cA
17 6mhk-a1-m1-cA 536 46 0.2456 0.0261 0.3043 3.9 6mhk-a1-m1-cB_6mhk-a1-m1-cA
18 5uvr-a2-m2-cA 97 20 0.1579 0.0928 0.4500 6.3 5uvr-a2-m1-cA_5uvr-a2-m2-cA
19 5uvr-a2-m1-cA 97 20 0.1579 0.0928 0.4500 6.3 5uvr-a2-m1-cA_5uvr-a2-m2-cA
20 2rjz-a1-m1-cA 135 31 0.1930 0.0815 0.3548 6.4 2rjz-a1-m1-cB_2rjz-a1-m1-cA
21 2rjz-a1-m1-cB 130 30 0.1930 0.0846 0.3667 6.8 2rjz-a1-m1-cB_2rjz-a1-m1-cA
22 3ocm-a3-m1-cA 146 34 0.2456 0.0959 0.4118 9.5 3ocm-a3-m1-cB_3ocm-a3-m1-cA
23 3ocm-a1-m4-cA 146 34 0.2456 0.0959 0.4118 9.5 3ocm-a1-m2-cA_3ocm-a1-m4-cA
24 3ocm-a1-m2-cA 146 34 0.2456 0.0959 0.4118 9.5 3ocm-a1-m2-cA_3ocm-a1-m4-cA
25 3ocm-a1-m1-cA 146 34 0.2456 0.0959 0.4118 9.5 3ocm-a1-m4-cB_3ocm-a1-m1-cA
26 1xzw-a1-m1-cA 424 41 0.2281 0.0307 0.3171 9.7 1xzw-a1-m1-cA_1xzw-a1-m1-cB
27 1xzw-a1-m1-cB 426 41 0.2281 0.0305 0.3171 9.8 1xzw-a1-m1-cA_1xzw-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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