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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
PRNVDAILEPYKTENARLVKENNEMHLGLLKLREEKDRISRELKAYIRKLDHETSDLKFL
NNQYVQKVRSLEKDSNGKTERILQLQEKNM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7bji-a2-m1-cD 90 90 1.0000 1.0000 1.0000 6.66e-61 7bji-a2-m1-cD_7bji-a2-m1-cB
2 7bji-a2-m1-cB 92 90 1.0000 0.9783 1.0000 6.93e-61 7bji-a2-m1-cD_7bji-a2-m1-cB
3 5fcn-a1-m1-cA 54 52 0.3222 0.5370 0.5577 5.24e-13 5fcn-a1-m1-cB_5fcn-a1-m1-cA
4 5fcn-a1-m1-cB 53 51 0.3111 0.5283 0.5490 2.09e-12 5fcn-a1-m1-cB_5fcn-a1-m1-cA
5 5agc-a1-m2-cD 216 26 0.1333 0.0556 0.4615 9.3 5agc-a1-m2-cC_5agc-a1-m2-cD
6 5agc-a1-m2-cC 216 26 0.1333 0.0556 0.4615 9.3 5agc-a1-m2-cC_5agc-a1-m2-cD
7 5agc-a3-m8-cA 217 26 0.1333 0.0553 0.4615 9.5 5agc-a3-m8-cA_5agc-a3-m1-cB, 5agc-a3-m8-cA_5agc-a3-m6-cB

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Reference:
Jacob Schwartz et al.

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