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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
PSKLEGAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMND
LDSNKDNEVDFNEFVVLVAALTVACNDFFQEQQKKRSK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2y5i-a3-m1-cF 98 98 1.0000 1.0000 1.0000 2.86e-68 2y5i-a3-m1-cE_2y5i-a3-m1-cF
2 2y5i-a3-m1-cE 97 97 0.9898 1.0000 1.0000 1.52e-67 2y5i-a3-m1-cE_2y5i-a3-m1-cF
3 5hyd-a2-m1-cD 96 96 0.6633 0.6771 0.6771 1.26e-43 5hyd-a2-m1-cC_5hyd-a2-m1-cD
4 5hyd-a2-m1-cC 94 94 0.6531 0.6809 0.6809 1.34e-42 5hyd-a2-m1-cC_5hyd-a2-m1-cD
5 1k2h-a1-m1-cB 93 90 0.6327 0.6667 0.6889 7.34e-37 1k2h-a1-m1-cA_1k2h-a1-m1-cB
6 1k2h-a1-m1-cA 93 90 0.6327 0.6667 0.6889 7.34e-37 1k2h-a1-m1-cA_1k2h-a1-m1-cB
7 2jpt-a1-m1-cB 93 90 0.6122 0.6452 0.6667 1.80e-36 2jpt-a1-m1-cA_2jpt-a1-m1-cB
8 2jpt-a1-m1-cA 93 90 0.6122 0.6452 0.6667 1.80e-36 2jpt-a1-m1-cA_2jpt-a1-m1-cB
9 2llt-a1-m1-cB 92 90 0.6122 0.6522 0.6667 1.67e-33 2llt-a1-m1-cA_2llt-a1-m1-cB
10 2llt-a1-m1-cA 92 90 0.6122 0.6522 0.6667 1.67e-33 2llt-a1-m1-cA_2llt-a1-m1-cB
11 5k89-a2-m3-cH 89 90 0.5918 0.6517 0.6444 1.89e-33 5k89-a2-m1-cH_5k89-a2-m3-cH
12 5k89-a2-m1-cH 89 90 0.5918 0.6517 0.6444 1.89e-33 5k89-a2-m1-cH_5k89-a2-m3-cH
13 4duq-a1-m1-cB 90 89 0.4796 0.5222 0.5281 8.31e-28 4duq-a1-m1-cA_4duq-a1-m1-cB
14 2rgi-a1-m1-cA 93 89 0.4796 0.5054 0.5281 8.56e-28 2rgi-a1-m1-cB_2rgi-a1-m1-cA
15 2rgi-a1-m1-cB 92 89 0.4796 0.5109 0.5281 8.88e-28 2rgi-a1-m1-cB_2rgi-a1-m1-cA
16 4duq-a1-m1-cA 88 87 0.4592 0.5114 0.5172 5.43e-26 4duq-a1-m1-cA_4duq-a1-m1-cB
17 1j55-a1-m2-cA 88 90 0.4490 0.5000 0.4889 2.25e-23 1j55-a1-m1-cA_1j55-a1-m2-cA
18 1j55-a1-m1-cA 88 90 0.4490 0.5000 0.4889 2.25e-23 1j55-a1-m1-cA_1j55-a1-m2-cA
19 2luc-a1-m1-cB 105 89 0.3776 0.3524 0.4157 6.58e-23 2luc-a1-m1-cA_2luc-a1-m1-cB
20 2luc-a1-m1-cA 105 89 0.3776 0.3524 0.4157 6.58e-23 2luc-a1-m1-cA_2luc-a1-m1-cB
21 1nsh-a1-m1-cB 101 89 0.3673 0.3564 0.4045 3.42e-21 1nsh-a1-m1-cA_1nsh-a1-m1-cB
22 1nsh-a1-m1-cA 101 89 0.3673 0.3564 0.4045 3.42e-21 1nsh-a1-m1-cA_1nsh-a1-m1-cB
23 6wn7-a3-m1-cE 91 91 0.4082 0.4396 0.4396 1.25e-20 6wn7-a3-m1-cF_6wn7-a3-m1-cE
24 1qls-a1-m2-cA 95 95 0.3469 0.3579 0.3579 1.65e-20 1qls-a1-m1-cA_1qls-a1-m2-cA
25 1qls-a1-m1-cA 95 95 0.3469 0.3579 0.3579 1.65e-20 1qls-a1-m1-cA_1qls-a1-m2-cA
26 3nsl-a3-m1-cC 93 88 0.3878 0.4086 0.4318 1.77e-20 3nsl-a3-m1-cD_3nsl-a3-m1-cC
27 3nsl-a3-m1-cD 92 88 0.3878 0.4130 0.4318 1.92e-20 3nsl-a3-m1-cD_3nsl-a3-m1-cC
28 2cnp-a1-m1-cB 90 87 0.4184 0.4556 0.4713 2.94e-20 2cnp-a1-m1-cA_2cnp-a1-m1-cB
29 2cnp-a1-m1-cA 90 87 0.4184 0.4556 0.4713 2.94e-20 2cnp-a1-m1-cA_2cnp-a1-m1-cB
30 1jwd-a1-m1-cB 90 87 0.4184 0.4556 0.4713 2.94e-20 1jwd-a1-m1-cA_1jwd-a1-m1-cB
31 1jwd-a1-m1-cA 90 87 0.4184 0.4556 0.4713 2.94e-20 1jwd-a1-m1-cA_1jwd-a1-m1-cB
32 1cnp-a1-m1-cB 90 87 0.4184 0.4556 0.4713 2.94e-20 1cnp-a1-m1-cA_1cnp-a1-m1-cB
33 1cnp-a1-m1-cA 90 87 0.4184 0.4556 0.4713 2.94e-20 1cnp-a1-m1-cA_1cnp-a1-m1-cB
34 1a03-a1-m1-cB 90 87 0.4184 0.4556 0.4713 2.94e-20 1a03-a1-m1-cA_1a03-a1-m1-cB
35 1a03-a1-m1-cA 90 87 0.4184 0.4556 0.4713 2.94e-20 1a03-a1-m1-cA_1a03-a1-m1-cB
36 6wn7-a3-m1-cF 88 88 0.4082 0.4545 0.4545 3.67e-20 6wn7-a3-m1-cF_6wn7-a3-m1-cE
37 4p2y-a3-m3-cB 88 84 0.3980 0.4432 0.4643 8.40e-20 4p2y-a3-m1-cB_4p2y-a3-m3-cB
38 4p2y-a3-m1-cB 88 84 0.3980 0.4432 0.4643 8.40e-20 4p2y-a3-m1-cB_4p2y-a3-m3-cB
39 4ybh-a1-m2-cB 89 84 0.3980 0.4382 0.4643 1.04e-19 4ybh-a1-m1-cB_4ybh-a1-m2-cB
40 4ybh-a1-m1-cB 89 84 0.3980 0.4382 0.4643 1.04e-19 4ybh-a1-m1-cB_4ybh-a1-m2-cB
41 1k9k-a2-m2-cB 89 84 0.3980 0.4382 0.4643 1.04e-19 1k9k-a2-m1-cA_1k9k-a2-m2-cB, 1k9k-a2-m1-cB_1k9k-a2-m2-cB, 1k9k-a2-m2-cA_1k9k-a2-m2-cB
42 1k9k-a2-m2-cA 89 84 0.3980 0.4382 0.4643 1.04e-19 1k9k-a2-m2-cA_1k9k-a2-m2-cB
43 1k9k-a2-m1-cB 89 84 0.3980 0.4382 0.4643 1.04e-19 1k9k-a2-m1-cB_1k9k-a2-m2-cB
44 1k9k-a2-m1-cA 89 84 0.3980 0.4382 0.4643 1.04e-19 1k9k-a2-m1-cA_1k9k-a2-m2-cB
45 2kax-a1-m1-cB 92 93 0.3980 0.4239 0.4194 2.14e-19 2kax-a1-m1-cA_2kax-a1-m1-cB
46 2kax-a1-m1-cA 92 93 0.3980 0.4239 0.4194 2.14e-19 2kax-a1-m1-cA_2kax-a1-m1-cB
47 6zdy-a1-m2-cA 108 92 0.3571 0.3241 0.3804 3.56e-18 6zdy-a1-m1-cA_6zdy-a1-m2-cA
48 6zdy-a1-m1-cA 108 92 0.3571 0.3241 0.3804 3.56e-18 6zdy-a1-m1-cA_6zdy-a1-m2-cA
49 2wcb-a1-m1-cB 91 79 0.3469 0.3736 0.4304 1.14e-17 2wcb-a1-m1-cB_2wcb-a1-m1-cA
50 2wcb-a1-m1-cA 92 86 0.3571 0.3804 0.4070 1.20e-17 2wcb-a1-m1-cB_2wcb-a1-m1-cA
51 2wcf-a3-m1-cE 90 79 0.3469 0.3778 0.4304 1.25e-17 2wcf-a3-m1-cF_2wcf-a3-m1-cE
52 1gqm-a2-m1-cI 87 78 0.3469 0.3908 0.4359 1.43e-17 1gqm-a2-m1-cG_1gqm-a2-m1-cI
53 1gqm-a2-m1-cG 87 78 0.3469 0.3908 0.4359 1.43e-17 1gqm-a2-m1-cG_1gqm-a2-m1-cI
54 1gqm-a1-m1-cD 87 78 0.3469 0.3908 0.4359 1.43e-17 1gqm-a1-m1-cC_1gqm-a1-m1-cD
55 1gqm-a1-m1-cC 87 78 0.3469 0.3908 0.4359 1.43e-17 1gqm-a1-m1-cC_1gqm-a1-m1-cD
56 1k8u-a1-m2-cA 87 86 0.3878 0.4368 0.4419 2.38e-17 1k8u-a1-m1-cA_1k8u-a1-m2-cA
57 1k8u-a1-m1-cA 87 86 0.3878 0.4368 0.4419 2.38e-17 1k8u-a1-m1-cA_1k8u-a1-m2-cA
58 2wcf-a3-m1-cF 88 79 0.3367 0.3750 0.4177 7.35e-15 2wcf-a3-m1-cF_2wcf-a3-m1-cE
59 2egd-a1-m1-cA 86 80 0.2857 0.3256 0.3500 4.94e-09 2egd-a1-m1-cA_2egd-a1-m1-cB
60 2egd-a1-m1-cB 91 80 0.2857 0.3077 0.3500 6.63e-09 2egd-a1-m1-cA_2egd-a1-m1-cB
61 2ki6-a1-m1-cC 96 80 0.2857 0.2917 0.3500 7.15e-09 2ki6-a1-m1-cC_2ki6-a1-m1-cD
62 2ki6-a1-m1-cD 97 80 0.2857 0.2887 0.3500 7.30e-09 2ki6-a1-m1-cC_2ki6-a1-m1-cD
63 1yut-a1-m1-cB 98 80 0.2857 0.2857 0.3500 7.62e-09 1yut-a1-m1-cA_1yut-a1-m1-cB
64 1yut-a1-m1-cA 98 80 0.2857 0.2857 0.3500 7.62e-09 1yut-a1-m1-cA_1yut-a1-m1-cB
65 1yus-a1-m1-cB 98 80 0.2857 0.2857 0.3500 7.62e-09 1yus-a1-m1-cA_1yus-a1-m1-cB
66 1yus-a1-m1-cA 98 80 0.2857 0.2857 0.3500 7.62e-09 1yus-a1-m1-cA_1yus-a1-m1-cB
67 2cxj-a1-m1-cB 98 80 0.2755 0.2755 0.3375 1.01e-08 2cxj-a1-m1-cA_2cxj-a1-m1-cB
68 2cxj-a1-m1-cA 98 80 0.2755 0.2755 0.3375 1.01e-08 2cxj-a1-m1-cA_2cxj-a1-m1-cB
69 3nxa-a2-m1-cC 97 95 0.2755 0.2784 0.2842 2.54e-08 3nxa-a2-m1-cD_3nxa-a2-m1-cC
70 2m0r-a1-m1-cB 104 78 0.2959 0.2788 0.3718 8.26e-06 2m0r-a1-m1-cA_2m0r-a1-m1-cB
71 2m0r-a1-m1-cA 104 78 0.2959 0.2788 0.3718 8.26e-06 2m0r-a1-m1-cA_2m0r-a1-m1-cB
72 1qx2-a5-m1-cA 75 84 0.2755 0.3600 0.3214 3.66e-04 1qx2-a5-m1-cB_1qx2-a5-m1-cA
73 1qx2-a3-m2-cA 75 84 0.2755 0.3600 0.3214 3.66e-04 1qx2-a3-m1-cB_1qx2-a3-m2-cA
74 1qx2-a5-m1-cB 74 84 0.2755 0.3649 0.3214 4.03e-04 1qx2-a5-m1-cB_1qx2-a5-m1-cA
75 1qx2-a3-m1-cB 74 84 0.2755 0.3649 0.3214 4.03e-04 1qx2-a3-m1-cB_1qx2-a3-m2-cA
76 4jwq-a1-m1-cC 73 43 0.1735 0.2329 0.3953 0.011 4jwq-a1-m1-cA_4jwq-a1-m1-cC
77 4jwq-a1-m1-cA 69 44 0.1735 0.2464 0.3864 0.013 4jwq-a1-m1-cA_4jwq-a1-m1-cC
78 1ht9-a1-m1-cB 76 74 0.2959 0.3816 0.3919 0.018 1ht9-a1-m1-cA_1ht9-a1-m1-cB
79 1ht9-a1-m1-cA 76 74 0.2959 0.3816 0.3919 0.018 1ht9-a1-m1-cA_1ht9-a1-m1-cB
80 4pcw-a2-m1-cC 91 75 0.2959 0.3187 0.3867 0.039 4pcw-a2-m1-cD_4pcw-a2-m1-cC
81 3k21-a1-m2-cA 178 48 0.1633 0.0899 0.3333 0.048 3k21-a1-m1-cA_3k21-a1-m2-cA
82 3k21-a1-m1-cA 178 48 0.1633 0.0899 0.3333 0.048 3k21-a1-m1-cA_3k21-a1-m2-cA
83 4pcw-a2-m1-cD 88 75 0.2959 0.3295 0.3867 0.052 4pcw-a2-m1-cD_4pcw-a2-m1-cC
84 4l0m-a1-m2-cA 233 27 0.1224 0.0515 0.4444 0.054 4l0m-a1-m1-cA_4l0m-a1-m2-cA
85 4l0m-a1-m1-cA 233 27 0.1224 0.0515 0.4444 0.054 4l0m-a1-m1-cA_4l0m-a1-m2-cA
86 1k9u-a1-m1-cB 76 44 0.1531 0.1974 0.3409 0.43 1k9u-a1-m1-cA_1k9u-a1-m1-cB
87 1k9u-a1-m1-cA 76 44 0.1531 0.1974 0.3409 0.43 1k9u-a1-m1-cA_1k9u-a1-m1-cB
88 3o4y-a1-m2-cA 172 43 0.1531 0.0872 0.3488 0.63 3o4y-a1-m1-cA_3o4y-a1-m2-cA
89 3o4y-a1-m1-cA 172 43 0.1531 0.0872 0.3488 0.63 3o4y-a1-m1-cA_3o4y-a1-m2-cA
90 4p5w-a1-m1-cA 312 73 0.2347 0.0737 0.3151 0.75 4p5w-a1-m1-cB_4p5w-a1-m1-cA
91 4ds7-a6-m2-cB 142 38 0.1327 0.0915 0.3421 0.96 4ds7-a6-m2-cB_4ds7-a6-m1-cA, 4ds7-a6-m2-cB_4ds7-a6-m2-cA
92 4ds7-a6-m2-cA 144 38 0.1327 0.0903 0.3421 0.97 4ds7-a6-m2-cB_4ds7-a6-m2-cA
93 4ds7-a6-m1-cA 144 38 0.1327 0.0903 0.3421 0.97 4ds7-a6-m2-cB_4ds7-a6-m1-cA
94 3pm8-a1-m1-cB 174 53 0.1429 0.0805 0.2642 1.9 3pm8-a1-m1-cA_3pm8-a1-m1-cB
95 1bjf-a1-m1-cB 181 30 0.0816 0.0442 0.2667 2.3 1bjf-a1-m1-cA_1bjf-a1-m1-cB
96 1bjf-a1-m1-cA 181 30 0.0816 0.0442 0.2667 2.3 1bjf-a1-m1-cA_1bjf-a1-m1-cB
97 6e1m-a1-m1-cB 533 37 0.1327 0.0244 0.3514 2.4 6e1m-a1-m1-cA_6e1m-a1-m1-cB
98 6e1m-a1-m1-cA 533 37 0.1327 0.0244 0.3514 2.4 6e1m-a1-m1-cA_6e1m-a1-m1-cB
99 3nxa-a2-m1-cD 74 93 0.2245 0.2973 0.2366 3.2 3nxa-a2-m1-cD_3nxa-a2-m1-cC
100 3pm8-a1-m1-cA 165 26 0.0816 0.0485 0.3077 3.2 3pm8-a1-m1-cA_3pm8-a1-m1-cB
101 5jhy-a1-m1-cB 734 33 0.1327 0.0177 0.3939 6.3 5jhy-a1-m1-cB_5jhy-a1-m1-cA
102 5jhy-a1-m1-cA 735 33 0.1327 0.0177 0.3939 6.3 5jhy-a1-m1-cB_5jhy-a1-m1-cA
103 4aqj-a1-m2-cA 96 80 0.2041 0.2083 0.2500 6.4 4aqj-a1-m1-cA_4aqj-a1-m2-cA
104 4aqj-a1-m1-cA 96 80 0.2041 0.2083 0.2500 6.4 4aqj-a1-m1-cA_4aqj-a1-m2-cA
105 4ik3-a1-m2-cA 393 26 0.0816 0.0204 0.3077 7.4 4ik3-a1-m1-cA_4ik3-a1-m2-cA
106 4ik3-a1-m1-cA 393 26 0.0816 0.0204 0.3077 7.4 4ik3-a1-m1-cA_4ik3-a1-m2-cA
107 3gvi-a2-m2-cF 314 32 0.1327 0.0414 0.4062 7.9 3gvi-a2-m1-cE_3gvi-a2-m2-cF, 3gvi-a2-m1-cF_3gvi-a2-m2-cF, 3gvi-a2-m2-cE_3gvi-a2-m2-cF
108 3gvi-a2-m2-cE 314 32 0.1327 0.0414 0.4062 7.9 3gvi-a2-m2-cE_3gvi-a2-m2-cF
109 3gvi-a2-m1-cF 314 32 0.1327 0.0414 0.4062 7.9 3gvi-a2-m1-cF_3gvi-a2-m2-cF
110 3gvi-a2-m1-cE 314 32 0.1327 0.0414 0.4062 7.9 3gvi-a2-m1-cE_3gvi-a2-m2-cF
111 7vgf-a1-m1-cB 550 65 0.2143 0.0382 0.3231 8.5 7vgf-a1-m1-cA_7vgf-a1-m1-cB
112 7vgf-a1-m1-cA 550 65 0.2143 0.0382 0.3231 8.5 7vgf-a1-m1-cA_7vgf-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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