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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
PSMKERQVCCGARDEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRRDYLKFKE
KFEA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6pcf-a1-m2-cB 65 64 1.0000 0.9846 1.0000 3.01e-42 6pcf-a1-m2-cC_6pcf-a1-m2-cB
2 6pcf-a1-m1-cD 64 64 1.0000 1.0000 1.0000 3.46e-42 6pcf-a1-m2-cC_6pcf-a1-m1-cD
3 6pce-a1-m1-cB 70 64 0.9844 0.9000 0.9844 1.08e-40 6pce-a1-m1-cA_6pce-a1-m1-cB
4 6pce-a1-m1-cA 60 60 0.9219 0.9833 0.9833 1.44e-37 6pce-a1-m1-cA_6pce-a1-m1-cB
5 6pcf-a1-m2-cC 56 56 0.8750 1.0000 1.0000 4.53e-36 6pcf-a1-m2-cC_6pcf-a1-m1-cD, 6pcf-a1-m2-cC_6pcf-a1-m2-cB
6 8h8r-a1-m1-cU 75 45 0.2188 0.1867 0.3111 0.11 8h8r-a1-m1-cH_8h8r-a1-m1-cU
7 8h8r-a1-m1-cH 75 45 0.2188 0.1867 0.3111 0.11 8h8r-a1-m1-cH_8h8r-a1-m1-cU
8 5fr9-a3-m1-cA 319 18 0.1562 0.0313 0.5556 0.24 5fr9-a3-m1-cA_5fr9-a3-m1-cH
9 5fr9-a3-m1-cB 320 18 0.1562 0.0312 0.5556 0.24 5fr9-a3-m1-cB_5fr9-a3-m1-cH
10 5fr9-a3-m1-cH 321 18 0.1562 0.0312 0.5556 0.24 5fr9-a3-m1-cA_5fr9-a3-m1-cH, 5fr9-a3-m1-cB_5fr9-a3-m1-cH
11 6f90-a1-m2-cA 714 49 0.2031 0.0182 0.2653 1.7 6f90-a1-m1-cA_6f90-a1-m2-cA
12 6f90-a1-m1-cA 714 49 0.2031 0.0182 0.2653 1.7 6f90-a1-m1-cA_6f90-a1-m2-cA
13 6dww-a1-m2-cA 483 30 0.1719 0.0228 0.3667 4.0 6dww-a1-m1-cA_6dww-a1-m2-cA
14 6dww-a1-m1-cA 483 30 0.1719 0.0228 0.3667 4.0 6dww-a1-m1-cA_6dww-a1-m2-cA
15 4d1q-a1-m2-cG 499 30 0.1719 0.0220 0.3667 4.1 4d1q-a1-m2-cG_4d1q-a1-m2-cB
16 4d1q-a1-m2-cB 505 30 0.1719 0.0218 0.3667 4.1 4d1q-a1-m2-cG_4d1q-a1-m2-cB
17 4d1q-a1-m2-cH 509 30 0.1719 0.0216 0.3667 4.2 4d1q-a1-m1-cH_4d1q-a1-m2-cH
18 4d1q-a1-m1-cH 509 30 0.1719 0.0216 0.3667 4.2 4d1q-a1-m1-cH_4d1q-a1-m2-cH
19 3wwj-a6-m1-cL 317 23 0.1719 0.0347 0.4783 5.7 3wwj-a6-m1-cL_3wwj-a6-m1-cJ
20 3wwj-a6-m1-cJ 318 23 0.1719 0.0346 0.4783 5.7 3wwj-a6-m1-cL_3wwj-a6-m1-cJ
21 7ebe-a2-m1-cH 533 29 0.1250 0.0150 0.2759 6.5 7ebe-a2-m1-cH_7ebe-a2-m1-cG
22 7ebe-a1-m1-cA 544 29 0.1250 0.0147 0.2759 6.8 7ebe-a1-m1-cD_7ebe-a1-m1-cA
23 7ebe-a2-m1-cG 535 29 0.1250 0.0150 0.2759 6.8 7ebe-a2-m1-cG_7ebe-a2-m1-cE, 7ebe-a2-m1-cH_7ebe-a2-m1-cG
24 7ebe-a2-m1-cE 542 29 0.1250 0.0148 0.2759 7.0 7ebe-a2-m1-cG_7ebe-a2-m1-cE
25 7ebe-a1-m1-cD 541 29 0.1250 0.0148 0.2759 7.1 7ebe-a1-m1-cD_7ebe-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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