Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
PSMKERQVCWGARDEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRRDYLKFKE
KFEAGQFEPS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6pce-a1-m1-cB 70 70 1.0000 1.0000 1.0000 4.62e-47 6pce-a1-m1-cA_6pce-a1-m1-cB
2 6pcf-a1-m2-cB 65 64 0.9000 0.9692 0.9844 9.60e-41 6pcf-a1-m2-cC_6pcf-a1-m2-cB
3 6pcf-a1-m1-cD 64 64 0.9000 0.9844 0.9844 1.18e-40 6pcf-a1-m2-cC_6pcf-a1-m1-cD
4 6pce-a1-m1-cA 60 60 0.8571 1.0000 1.0000 3.64e-39 6pce-a1-m1-cA_6pce-a1-m1-cB
5 6pcf-a1-m2-cC 56 56 0.7857 0.9821 0.9821 1.36e-34 6pcf-a1-m2-cC_6pcf-a1-m1-cD, 6pcf-a1-m2-cC_6pcf-a1-m2-cB
6 8h8r-a1-m1-cU 75 65 0.2429 0.2267 0.2615 0.015 8h8r-a1-m1-cH_8h8r-a1-m1-cU
7 8h8r-a1-m1-cH 75 65 0.2429 0.2267 0.2615 0.015 8h8r-a1-m1-cH_8h8r-a1-m1-cU
8 5fr9-a3-m1-cA 319 18 0.1429 0.0313 0.5556 0.30 5fr9-a3-m1-cA_5fr9-a3-m1-cH
9 5fr9-a3-m1-cB 320 18 0.1429 0.0312 0.5556 0.30 5fr9-a3-m1-cB_5fr9-a3-m1-cH
10 5fr9-a3-m1-cH 321 18 0.1429 0.0312 0.5556 0.30 5fr9-a3-m1-cA_5fr9-a3-m1-cH, 5fr9-a3-m1-cB_5fr9-a3-m1-cH
11 4zzj-a2-m2-cA 344 26 0.1714 0.0349 0.4615 2.5 4zzj-a2-m1-cA_4zzj-a2-m2-cA
12 4zzj-a2-m1-cA 344 26 0.1714 0.0349 0.4615 2.5 4zzj-a2-m1-cA_4zzj-a2-m2-cA
13 4zzi-a1-m2-cA 335 26 0.1714 0.0358 0.4615 2.6 4zzi-a1-m1-cA_4zzi-a1-m2-cA
14 4zzi-a1-m1-cA 335 26 0.1714 0.0358 0.4615 2.6 4zzi-a1-m1-cA_4zzi-a1-m2-cA
15 4i5i-a3-m1-cB 272 26 0.1714 0.0441 0.4615 2.9 4i5i-a3-m1-cA_4i5i-a3-m1-cB
16 4i5i-a3-m1-cA 272 26 0.1714 0.0441 0.4615 2.9 4i5i-a3-m1-cA_4i5i-a3-m1-cB
17 6f90-a1-m2-cA 714 49 0.1857 0.0182 0.2653 3.6 6f90-a1-m1-cA_6f90-a1-m2-cA
18 6f90-a1-m1-cA 714 49 0.1857 0.0182 0.2653 3.6 6f90-a1-m1-cA_6f90-a1-m2-cA
19 6dww-a1-m2-cA 483 30 0.1571 0.0228 0.3667 4.6 6dww-a1-m1-cA_6dww-a1-m2-cA
20 6dww-a1-m1-cA 483 30 0.1571 0.0228 0.3667 4.6 6dww-a1-m1-cA_6dww-a1-m2-cA
21 4d1q-a1-m2-cG 499 30 0.1571 0.0220 0.3667 4.9 4d1q-a1-m2-cG_4d1q-a1-m2-cB
22 4d1q-a1-m2-cH 509 30 0.1571 0.0216 0.3667 4.9 4d1q-a1-m1-cH_4d1q-a1-m2-cH
23 4d1q-a1-m1-cH 509 30 0.1571 0.0216 0.3667 4.9 4d1q-a1-m1-cH_4d1q-a1-m2-cH
24 4d1q-a1-m2-cB 505 30 0.1571 0.0218 0.3667 5.0 4d1q-a1-m2-cG_4d1q-a1-m2-cB
25 6xbu-a1-m2-cA 605 18 0.1429 0.0165 0.5556 6.7 6xbu-a1-m1-cA_6xbu-a1-m2-cA
26 6xbu-a1-m1-cA 605 18 0.1429 0.0165 0.5556 6.7 6xbu-a1-m1-cA_6xbu-a1-m2-cA
27 3wwj-a6-m1-cL 317 23 0.1571 0.0347 0.4783 7.0 3wwj-a6-m1-cL_3wwj-a6-m1-cJ
28 3wwj-a6-m1-cJ 318 23 0.1571 0.0346 0.4783 7.0 3wwj-a6-m1-cL_3wwj-a6-m1-cJ
29 3fnb-a1-m1-cB 361 41 0.1429 0.0277 0.2439 7.1 3fnb-a1-m1-cB_3fnb-a1-m1-cA
30 3fnb-a1-m1-cA 364 41 0.1429 0.0275 0.2439 7.5 3fnb-a1-m1-cB_3fnb-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600