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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
PSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAAVRGAANGLAEVLESHIR
ETFDRNDCYSREVSQSVDDTIELVRAYLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5lbm-a1-m1-cD 89 89 1.0000 1.0000 1.0000 1.38e-60 5lbm-a1-m1-cA_5lbm-a1-m1-cD, 5lbm-a1-m1-cB_5lbm-a1-m1-cD, 5lbm-a1-m1-cC_5lbm-a1-m1-cD
2 5lbm-a1-m1-cC 89 89 1.0000 1.0000 1.0000 1.38e-60 5lbm-a1-m1-cC_5lbm-a1-m1-cD
3 5lbm-a1-m1-cB 82 82 0.9213 1.0000 1.0000 1.55e-54 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cB_5lbm-a1-m1-cD
4 5lbm-a1-m1-cA 82 82 0.9213 1.0000 1.0000 1.55e-54 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cA_5lbm-a1-m1-cD
5 5lcy-a1-m1-cD 88 88 0.4944 0.5000 0.5000 4.02e-24 5lcy-a1-m1-cA_5lcy-a1-m1-cD, 5lcy-a1-m1-cC_5lcy-a1-m1-cD
6 5lcy-a1-m1-cC 88 88 0.4944 0.5000 0.5000 4.02e-24 5lcy-a1-m1-cC_5lcy-a1-m1-cD
7 5lcy-a1-m1-cA 88 88 0.4944 0.5000 0.5000 4.02e-24 5lcy-a1-m1-cA_5lcy-a1-m1-cD
8 4m1p-a2-m9-cA 96 95 0.2809 0.2604 0.2632 2.20e-06 4m1p-a2-m12-cA_4m1p-a2-m9-cA
9 4m1p-a2-m12-cA 96 95 0.2809 0.2604 0.2632 2.20e-06 4m1p-a2-m12-cA_4m1p-a2-m9-cA
10 4m1p-a1-m4-cA 96 95 0.2809 0.2604 0.2632 2.20e-06 4m1p-a1-m3-cA_4m1p-a1-m4-cA
11 4m1p-a1-m3-cA 96 95 0.2809 0.2604 0.2632 2.20e-06 4m1p-a1-m3-cA_4m1p-a1-m4-cA
12 2hh7-a2-m4-cA 85 61 0.2360 0.2471 0.3443 6.37e-06 2hh7-a2-m1-cA_2hh7-a2-m4-cA, 2hh7-a2-m3-cA_2hh7-a2-m4-cA
13 2hh7-a2-m3-cA 85 61 0.2360 0.2471 0.3443 6.37e-06 2hh7-a2-m3-cA_2hh7-a2-m4-cA
14 2hh7-a2-m1-cA 85 61 0.2360 0.2471 0.3443 6.37e-06 2hh7-a2-m1-cA_2hh7-a2-m4-cA
15 4adz-a1-m2-cB 90 58 0.2584 0.2556 0.3966 1.50e-05 4adz-a1-m2-cA_4adz-a1-m2-cB
16 4adz-a1-m2-cA 90 58 0.2584 0.2556 0.3966 1.50e-05 4adz-a1-m2-cA_4adz-a1-m2-cB
17 4uig-a1-m4-cA 91 58 0.2584 0.2527 0.3966 2.00e-05 4uig-a1-m3-cA_4uig-a1-m4-cA
18 4uig-a1-m3-cA 91 58 0.2584 0.2527 0.3966 2.00e-05 4uig-a1-m3-cA_4uig-a1-m4-cA
19 5fmn-a1-m2-cB 89 64 0.2360 0.2360 0.3281 8.60e-05 5fmn-a1-m1-cA_5fmn-a1-m2-cB, 5fmn-a1-m2-cA_5fmn-a1-m2-cB
20 5fmn-a1-m2-cA 86 64 0.2360 0.2442 0.3281 8.68e-05 5fmn-a1-m2-cA_5fmn-a1-m2-cB
21 5fmn-a1-m1-cA 86 64 0.2360 0.2442 0.3281 8.68e-05 5fmn-a1-m1-cA_5fmn-a1-m2-cB
22 6ahx-a1-m2-cA 60 49 0.2135 0.3167 0.3878 0.001 6ahx-a1-m1-cA_6ahx-a1-m2-cA
23 6ahx-a1-m1-cA 60 49 0.2135 0.3167 0.3878 0.001 6ahx-a1-m1-cA_6ahx-a1-m2-cA
24 5tpm-a2-m1-cC 148 77 0.2809 0.1689 0.3247 0.66 5tpm-a2-m1-cD_5tpm-a2-m1-cC
25 5tpm-a2-m1-cD 136 77 0.2809 0.1838 0.3247 0.71 5tpm-a2-m1-cD_5tpm-a2-m1-cC
26 4l6y-a1-m1-cA 445 44 0.1685 0.0337 0.3409 2.2 4l6y-a1-m1-cB_4l6y-a1-m1-cA
27 4l6y-a1-m1-cB 432 44 0.1685 0.0347 0.3409 2.3 4l6y-a1-m1-cB_4l6y-a1-m1-cA
28 2p9x-a2-m2-cB 95 24 0.1348 0.1263 0.5000 2.4 2p9x-a2-m2-cB_2p9x-a2-m2-cC
29 2p9x-a1-m1-cB 95 24 0.1348 0.1263 0.5000 2.4 2p9x-a1-m1-cB_2p9x-a1-m1-cD
30 2p9x-a2-m2-cC 98 24 0.1348 0.1224 0.5000 2.7 2p9x-a2-m1-cA_2p9x-a2-m2-cC, 2p9x-a2-m2-cB_2p9x-a2-m2-cC
31 2p9x-a2-m1-cA 98 24 0.1348 0.1224 0.5000 2.7 2p9x-a2-m1-cA_2p9x-a2-m2-cC
32 2p9x-a1-m1-cD 98 24 0.1348 0.1224 0.5000 2.7 2p9x-a1-m1-cB_2p9x-a1-m1-cD, 2p9x-a1-m1-cC_2p9x-a1-m1-cD
33 2p9x-a1-m1-cC 98 24 0.1348 0.1224 0.5000 2.7 2p9x-a1-m1-cC_2p9x-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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