Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=98)
PSVLEVREKGYERLKEELAKAQRELKLKDEECERLSKVRDQLGQELEELTASLFEEAHKM
VREANIKQATAEKQLKEAQGKIDVLQAEVAALKTLVLS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6f6p-a1-m1-cD 98 98 1.0000 1.0000 1.0000 4.17e-63 6f6p-a1-m1-cB_6f6p-a1-m1-cD, 6f6p-a1-m1-cC_6f6p-a1-m1-cD
2 6f6p-a1-m1-cB 97 97 0.9898 1.0000 1.0000 8.18e-62 6f6p-a1-m1-cB_6f6p-a1-m1-cD
3 6f6p-a1-m1-cC 89 89 0.9082 1.0000 1.0000 3.59e-56 6f6p-a1-m1-cC_6f6p-a1-m1-cD
4 4lhx-a2-m1-cC 72 72 0.7347 1.0000 1.0000 2.27e-44 4lhx-a2-m1-cD_4lhx-a2-m1-cC
5 4lhx-a2-m1-cD 71 71 0.7245 1.0000 1.0000 7.98e-44 4lhx-a2-m1-cD_4lhx-a2-m1-cC
6 4li0-a2-m1-cD 69 69 0.6122 0.8696 0.8696 3.87e-28 4li0-a2-m1-cC_4li0-a2-m1-cD
7 4li0-a2-m1-cC 69 69 0.6122 0.8696 0.8696 3.87e-28 4li0-a2-m1-cC_4li0-a2-m1-cD
8 2e7s-a1-m1-cA 112 74 0.2857 0.2500 0.3784 2.44e-06 2e7s-a1-m1-cA_2e7s-a1-m1-cB
9 2e7s-a1-m1-cB 119 74 0.2857 0.2353 0.3784 2.77e-06 2e7s-a1-m1-cA_2e7s-a1-m1-cB
10 2e7s-a3-m1-cF 122 74 0.2857 0.2295 0.3784 2.94e-06 2e7s-a3-m1-cE_2e7s-a3-m1-cF
11 2e7s-a3-m1-cE 122 74 0.2857 0.2295 0.3784 2.94e-06 2e7s-a3-m1-cE_2e7s-a3-m1-cF
12 2ocy-a2-m2-cB 146 65 0.2449 0.1644 0.3692 7.79e-05 2ocy-a2-m1-cA_2ocy-a2-m2-cB, 2ocy-a2-m1-cB_2ocy-a2-m2-cB, 2ocy-a2-m2-cA_2ocy-a2-m2-cB
13 2ocy-a2-m2-cA 146 65 0.2449 0.1644 0.3692 7.79e-05 2ocy-a2-m1-cA_2ocy-a2-m2-cA, 2ocy-a2-m2-cA_2ocy-a2-m2-cB
14 2ocy-a2-m1-cB 146 65 0.2449 0.1644 0.3692 7.79e-05 2ocy-a2-m1-cB_2ocy-a2-m2-cB
15 2ocy-a2-m1-cA 146 65 0.2449 0.1644 0.3692 7.79e-05 2ocy-a2-m1-cA_2ocy-a2-m2-cA, 2ocy-a2-m1-cA_2ocy-a2-m2-cB
16 6njl-a1-m1-cC 785 41 0.1429 0.0178 0.3415 0.58 6njl-a1-m1-cA_6njl-a1-m1-cC
17 6njl-a1-m1-cA 785 41 0.1429 0.0178 0.3415 0.58 6njl-a1-m1-cA_6njl-a1-m1-cC
18 3saj-a2-m1-cB 366 41 0.1429 0.0383 0.3415 0.65 3saj-a2-m1-cB_3saj-a2-m1-cD
19 3saj-a2-m1-cD 367 41 0.1429 0.0381 0.3415 0.65 3saj-a2-m1-cB_3saj-a2-m1-cD
20 4akg-a1-m1-cB 2650 72 0.2245 0.0083 0.3056 2.1 4akg-a1-m1-cA_4akg-a1-m1-cB
21 4akg-a1-m1-cA 2650 72 0.2245 0.0083 0.3056 2.1 4akg-a1-m1-cA_4akg-a1-m1-cB
22 4w8f-a3-m1-cA 2608 72 0.2245 0.0084 0.3056 2.5 4w8f-a3-m1-cA_4w8f-a3-m1-cB
23 4w8f-a3-m1-cB 2609 72 0.2245 0.0084 0.3056 2.5 4w8f-a3-m1-cA_4w8f-a3-m1-cB
24 3ku5-a1-m3-cB 172 69 0.2143 0.1221 0.3043 3.5 3ku5-a1-m2-cB_3ku5-a1-m3-cB
25 3ku5-a1-m2-cB 172 69 0.2143 0.1221 0.3043 3.5 3ku5-a1-m2-cB_3ku5-a1-m3-cB
26 1jch-a1-m1-cC 468 102 0.2143 0.0449 0.2059 5.3 1jch-a1-m1-cA_1jch-a1-m1-cC
27 1jch-a1-m1-cA 468 102 0.2143 0.0449 0.2059 5.3 1jch-a1-m1-cA_1jch-a1-m1-cC
28 6brg-a5-m1-cD 500 30 0.1429 0.0280 0.4667 7.0 6brg-a5-m1-cC_6brg-a5-m1-cD
29 6brg-a5-m1-cC 500 30 0.1429 0.0280 0.4667 7.0 6brg-a5-m1-cC_6brg-a5-m1-cD
30 7f3t-a1-m1-cB 330 97 0.2347 0.0697 0.2371 9.1 7f3t-a1-m1-cA_7f3t-a1-m1-cB
31 7f3t-a1-m1-cA 330 97 0.2347 0.0697 0.2371 9.1 7f3t-a1-m1-cA_7f3t-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600