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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=56)
PTEEQAAENWRDAMKTELQTIRTEIQEETARRQEELNAQNLVKMQELMSNFFQKIT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4yv4-a3-m1-cH 57 56 1.0000 0.9825 1.0000 1.19e-34 4yv4-a3-m1-cE_4yv4-a3-m1-cH
2 4yv4-a2-m1-cD 56 56 1.0000 1.0000 1.0000 1.36e-34 4yv4-a2-m1-cB_4yv4-a2-m1-cD
3 4yv4-a3-m1-cE 53 53 0.9464 1.0000 1.0000 4.84e-32 4yv4-a3-m1-cE_4yv4-a3-m1-cH
4 4yv4-a2-m1-cB 51 51 0.9107 1.0000 1.0000 7.19e-31 4yv4-a2-m1-cB_4yv4-a2-m1-cD
5 1itk-a2-m2-cA 707 29 0.1786 0.0141 0.3448 3.9 1itk-a2-m1-cA_1itk-a2-m2-cA
6 1itk-a2-m1-cA 707 29 0.1786 0.0141 0.3448 3.9 1itk-a2-m1-cA_1itk-a2-m2-cA
7 3vlk-a1-m1-cB 714 29 0.1786 0.0140 0.3448 3.9 3vlk-a1-m1-cA_3vlk-a1-m1-cB
8 3vlk-a1-m1-cA 714 29 0.1786 0.0140 0.3448 3.9 3vlk-a1-m1-cA_3vlk-a1-m1-cB
9 7nfc-a1-m1-cA 3562 55 0.2500 0.0039 0.2545 6.0 7nfc-a1-m1-cF_7nfc-a1-m1-cA
10 7nfc-a1-m1-cF 3557 55 0.2500 0.0039 0.2545 6.3 7nfc-a1-m1-cF_7nfc-a1-m1-cA
11 8axk-a1-m1-cR 85 50 0.2679 0.1765 0.3000 9.6 8axk-a1-m1-cM_8axk-a1-m1-cR

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Reference:
Jacob Schwartz et al.

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