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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
PTKRKAQNRAAQRAFRERRAARVSELEDQIKKIEDDHEIHVATFKEQIANLSREVEQCRT
EMGWWRDR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7aw7-a1-m1-cE 68 68 1.0000 1.0000 1.0000 8.73e-45 7aw7-a1-m1-cE_7aw7-a1-m1-cD
2 7aw7-a1-m1-cD 93 68 1.0000 0.7312 1.0000 8.82e-45 7aw7-a1-m1-cE_7aw7-a1-m1-cD
3 1gd2-a2-m1-cH 64 42 0.3088 0.3281 0.5000 1.13e-05 1gd2-a2-m1-cG_1gd2-a2-m1-cH
4 1gd2-a2-m1-cG 64 42 0.3088 0.3281 0.5000 1.13e-05 1gd2-a2-m1-cG_1gd2-a2-m1-cH
5 5nz8-a1-m1-cA 884 46 0.1912 0.0147 0.2826 0.86 5nz8-a1-m1-cA_5nz8-a1-m1-cB
6 1cl8-a1-m2-cA 261 34 0.1618 0.0421 0.3235 1.7 1cl8-a1-m1-cA_1cl8-a1-m2-cA
7 1cl8-a1-m1-cA 261 34 0.1618 0.0421 0.3235 1.7 1cl8-a1-m1-cA_1cl8-a1-m2-cA
8 5t01-a1-m1-cB 62 56 0.2206 0.2419 0.2679 2.7 5t01-a1-m1-cA_5t01-a1-m1-cB
9 5t01-a1-m1-cA 62 56 0.2206 0.2419 0.2679 2.7 5t01-a1-m1-cA_5t01-a1-m1-cB
10 2v0o-a2-m2-cC 272 42 0.1765 0.0441 0.2857 4.6 2v0o-a2-m1-cC_2v0o-a2-m2-cC
11 2v0o-a2-m1-cC 272 42 0.1765 0.0441 0.2857 4.6 2v0o-a2-m1-cC_2v0o-a2-m2-cC

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Reference:
Jacob Schwartz et al.

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