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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
PTTGWKQENGMWYFYNTDGSMATGWVQVNGSWYYLNSNGSMKVNQWFQVGGKWYYVNTSG
ELAVNT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3hia-a1-m1-cB 83 66 1.0000 0.7952 1.0000 1.35e-42 3hia-a1-m1-cA_3hia-a1-m1-cB, 3hia-a1-m1-cC_3hia-a1-m1-cB
2 3hia-a1-m1-cA 66 66 1.0000 1.0000 1.0000 1.40e-42 3hia-a1-m1-cA_3hia-a1-m1-cB, 3hia-a1-m1-cA_3hia-a1-m1-cC
3 3hia-a1-m1-cC 74 65 0.9848 0.8784 1.0000 2.14e-41 3hia-a1-m1-cA_3hia-a1-m1-cC, 3hia-a1-m1-cC_3hia-a1-m1-cB
4 6jyx-a1-m1-cB 293 65 0.5455 0.1229 0.5538 2.31e-14 6jyx-a1-m1-cA_6jyx-a1-m1-cB
5 6jyx-a1-m1-cB 293 63 0.4394 0.0990 0.4603 3.99e-10 6jyx-a1-m1-cA_6jyx-a1-m1-cB
6 6jyx-a1-m1-cB 293 56 0.3485 0.0785 0.4107 2.28e-06 6jyx-a1-m1-cA_6jyx-a1-m1-cB
7 6jyx-a1-m1-cB 293 71 0.3182 0.0717 0.2958 1.31e-04 6jyx-a1-m1-cA_6jyx-a1-m1-cB
8 6jyx-a1-m1-cB 293 55 0.2424 0.0546 0.2909 0.38 6jyx-a1-m1-cA_6jyx-a1-m1-cB
9 6jyx-a1-m1-cB 293 40 0.2576 0.0580 0.4250 1.00 6jyx-a1-m1-cA_6jyx-a1-m1-cB
10 6jyx-a1-m1-cA 292 65 0.5455 0.1233 0.5538 2.36e-14 6jyx-a1-m1-cA_6jyx-a1-m1-cB
11 6jyx-a1-m1-cA 292 63 0.4394 0.0993 0.4603 3.99e-10 6jyx-a1-m1-cA_6jyx-a1-m1-cB
12 6jyx-a1-m1-cA 292 56 0.3485 0.0788 0.4107 2.33e-06 6jyx-a1-m1-cA_6jyx-a1-m1-cB
13 6jyx-a1-m1-cA 292 71 0.3182 0.0719 0.2958 1.28e-04 6jyx-a1-m1-cA_6jyx-a1-m1-cB
14 6jyx-a1-m1-cA 292 55 0.2424 0.0548 0.2909 0.39 6jyx-a1-m1-cA_6jyx-a1-m1-cB
15 6jyx-a1-m1-cA 292 40 0.2576 0.0582 0.4250 0.99 6jyx-a1-m1-cA_6jyx-a1-m1-cB
16 6szi-a1-m1-cA 1276 60 0.2424 0.0125 0.2667 0.077 6szi-a1-m1-cB_6szi-a1-m1-cA
17 4fkb-a1-m1-cB 387 37 0.1970 0.0336 0.3514 0.18 4fkb-a1-m1-cA_4fkb-a1-m1-cB
18 4fkb-a1-m1-cA 387 37 0.1970 0.0336 0.3514 0.18 4fkb-a1-m1-cA_4fkb-a1-m1-cB
19 5xpx-a1-m1-cA 384 37 0.1970 0.0339 0.3514 0.19 5xpx-a1-m1-cE_5xpx-a1-m1-cA
20 5xpx-a1-m1-cE 381 37 0.1970 0.0341 0.3514 0.20 5xpx-a1-m1-cE_5xpx-a1-m1-cA
21 6eqo-a1-m1-cB 1803 21 0.1364 0.0050 0.4286 6.0 6eqo-a1-m1-cB_6eqo-a1-m1-cA
22 3dec-a1-m2-cA 969 21 0.1667 0.0114 0.5238 9.1 3dec-a1-m1-cA_3dec-a1-m2-cA
23 3dec-a1-m1-cA 969 21 0.1667 0.0114 0.5238 9.1 3dec-a1-m1-cA_3dec-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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