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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
PTVIKVQNPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGPTGEAVAFESRDEATAAVIDL
NDRPIGSRKVKLSGP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ek1-a1-m1-cA 76 75 1.0000 0.9868 1.0000 4.58e-51 2ek1-a1-m1-cB_2ek1-a1-m1-cA
2 2ek1-a1-m1-cB 75 75 1.0000 1.0000 1.0000 6.12e-51 2ek1-a1-m1-cB_2ek1-a1-m1-cA
3 2peh-a3-m2-cB 104 37 0.2267 0.1635 0.4595 0.83 2peh-a3-m1-cA_2peh-a3-m2-cB
4 2peh-a3-m1-cA 104 37 0.2267 0.1635 0.4595 0.83 2peh-a3-m1-cA_2peh-a3-m2-cB
5 5det-a1-m1-cA 91 53 0.2533 0.2088 0.3585 2.0 5det-a1-m1-cA_5det-a1-m1-cB
6 5det-a1-m1-cB 94 53 0.2533 0.2021 0.3585 2.1 5det-a1-m1-cA_5det-a1-m1-cB
7 7lss-a1-m1-cC 785 37 0.1733 0.0166 0.3514 3.0 7lss-a1-m1-cA_7lss-a1-m1-cC
8 6mr3-a2-m2-cC 235 33 0.1733 0.0553 0.3939 3.2 6mr3-a2-m1-cC_6mr3-a2-m2-cC
9 6mr3-a2-m1-cC 235 33 0.1733 0.0553 0.3939 3.2 6mr3-a2-m1-cC_6mr3-a2-m2-cC
10 7t5o-a1-m1-cB 948 37 0.1733 0.0137 0.3514 4.4 7t5o-a1-m1-cC_7t5o-a1-m1-cB
11 7n9c-a1-m1-cB 812 29 0.1600 0.0148 0.4138 9.0 7n9c-a1-m1-cB_7n9c-a1-m1-cC
12 6zp7-a1-m1-cC 943 29 0.1600 0.0127 0.4138 9.4 6zp7-a1-m1-cB_6zp7-a1-m1-cC
13 6zp5-a1-m1-cB 943 29 0.1600 0.0127 0.4138 9.4 6zp5-a1-m1-cC_6zp5-a1-m1-cB
14 6zow-a1-m1-cC 943 29 0.1600 0.0127 0.4138 9.4 6zow-a1-m1-cA_6zow-a1-m1-cC
15 7mte-a1-m1-cA 895 29 0.1600 0.0134 0.4138 9.7 7mte-a1-m1-cC_7mte-a1-m1-cA
16 7mtc-a1-m1-cA 914 29 0.1600 0.0131 0.4138 9.9 7mtc-a1-m1-cC_7mtc-a1-m1-cA
17 7n9e-a1-m1-cC 943 29 0.1600 0.0127 0.4138 10.0 7n9e-a1-m1-cC_7n9e-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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