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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
PVDVKLEFVLYRKNVTLAELEAGQQQLLSLPTNAELNVEIANGVLLGNGELVQNDTLGVE
IHEWL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4yx1-a1-m1-cB 65 65 1.0000 1.0000 1.0000 7.36e-41 4yx1-a1-m1-cB_4yx1-a1-m1-cA
2 4yx1-a1-m1-cA 66 65 1.0000 0.9848 1.0000 9.22e-41 4yx1-a1-m1-cB_4yx1-a1-m1-cA
3 4tt9-a2-m1-cC 72 67 0.4000 0.3611 0.3881 8.32e-08 4tt9-a2-m1-cD_4tt9-a2-m1-cC
4 4tt9-a2-m1-cD 68 66 0.3846 0.3676 0.3788 1.37e-06 4tt9-a2-m1-cD_4tt9-a2-m1-cC
5 3uep-a1-m1-cB 85 47 0.3231 0.2471 0.4468 0.026 3uep-a1-m1-cA_3uep-a1-m1-cB
6 3uep-a1-m1-cA 85 47 0.3231 0.2471 0.4468 0.026 3uep-a1-m1-cA_3uep-a1-m1-cB
7 5kck-a1-m2-cA 421 38 0.1846 0.0285 0.3158 8.3 5kck-a1-m1-cA_5kck-a1-m2-cA
8 5kck-a1-m1-cA 421 38 0.1846 0.0285 0.3158 8.3 5kck-a1-m1-cA_5kck-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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