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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=24)
PVEDLIRFYNDLQQYLNVVTRHRY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2h4b-a1-m1-cD 24 24 1.0000 1.0000 1.0000 9.22e-12 2h4b-a1-m1-cC_2h4b-a1-m1-cD
2 2h4b-a1-m1-cC 24 24 1.0000 1.0000 1.0000 9.22e-12 2h4b-a1-m1-cC_2h4b-a1-m1-cD
3 2bf9-a1-m2-cA 35 23 0.9583 0.6571 1.0000 4.00e-11 2bf9-a1-m1-cA_2bf9-a1-m2-cA
4 2bf9-a1-m1-cA 35 23 0.9583 0.6571 1.0000 4.00e-11 2bf9-a1-m1-cA_2bf9-a1-m2-cA
5 1j5t-a2-m4-cA 233 23 0.3333 0.0343 0.3478 2.1 1j5t-a2-m1-cA_1j5t-a2-m4-cA, 1j5t-a2-m2-cA_1j5t-a2-m4-cA, 1j5t-a2-m3-cA_1j5t-a2-m4-cA
6 1j5t-a2-m3-cA 233 23 0.3333 0.0343 0.3478 2.1 1j5t-a2-m3-cA_1j5t-a2-m4-cA
7 1j5t-a2-m2-cA 233 23 0.3333 0.0343 0.3478 2.1 1j5t-a2-m2-cA_1j5t-a2-m4-cA
8 1j5t-a2-m1-cA 233 23 0.3333 0.0343 0.3478 2.1 1j5t-a2-m1-cA_1j5t-a2-m4-cA
9 7p4i-a1-m1-cC 428 12 0.3333 0.0187 0.6667 3.7 7p4i-a1-m1-cB_7p4i-a1-m1-cC
10 7p4i-a1-m1-cB 428 12 0.3333 0.0187 0.6667 3.7 7p4i-a1-m1-cB_7p4i-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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