Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=62)
PVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFDP
QN

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 2bzy-a1-m1-cB 62 62 1.0000 1.0000 1.0000 2.61e-42 2bzy-a1-m1-cA_2bzy-a1-m1-cB
2 2bzy-a1-m1-cA 62 62 1.0000 1.0000 1.0000 2.61e-42 2bzy-a1-m1-cA_2bzy-a1-m1-cB
3 2ak5-a1-m2-cB 64 45 0.2903 0.2812 0.4000 2.87e-07 2ak5-a1-m2-cA_2ak5-a1-m2-cB
4 2ak5-a1-m2-cA 60 45 0.2903 0.3000 0.4000 2.97e-07 2ak5-a1-m2-cA_2ak5-a1-m2-cB
5 5sxp-a2-m1-cB 61 41 0.2742 0.2787 0.4146 3.07e-07 5sxp-a2-m1-cD_5sxp-a2-m1-cB
6 5sxp-a2-m1-cD 60 41 0.2742 0.2833 0.4146 3.17e-07 5sxp-a2-m1-cD_5sxp-a2-m1-cB
7 2p4r-a2-m2-cA 55 41 0.2742 0.3091 0.4146 9.38e-07 2p4r-a2-m1-cA_2p4r-a2-m2-cA
8 2p4r-a2-m1-cA 55 41 0.2742 0.3091 0.4146 9.38e-07 2p4r-a2-m1-cA_2p4r-a2-m2-cA
9 2esw-a3-m1-cB 57 41 0.2742 0.2982 0.4146 1.00e-06 2esw-a3-m1-cB_2esw-a3-m1-cA
10 2esw-a3-m1-cA 60 41 0.2742 0.2833 0.4146 1.10e-06 2esw-a3-m1-cB_2esw-a3-m1-cA
11 6a9c-a1-m1-cA 59 44 0.2581 0.2712 0.3636 1.63e-04 6a9c-a1-m1-cA_6a9c-a1-m1-cB
12 6a9c-a1-m1-cB 66 44 0.2581 0.2424 0.3636 1.92e-04 6a9c-a1-m1-cA_6a9c-a1-m1-cB
13 2sem-a1-m1-cB 59 36 0.2097 0.2203 0.3611 2.70e-04 2sem-a1-m1-cA_2sem-a1-m1-cB
14 2sem-a1-m1-cA 58 36 0.2097 0.2241 0.3611 2.76e-04 2sem-a1-m1-cA_2sem-a1-m1-cB
15 6gbu-a1-m1-cD 64 59 0.3065 0.2969 0.3220 4.75e-04 6gbu-a1-m1-cH_6gbu-a1-m1-cD
16 6gbu-a1-m1-cH 63 59 0.3065 0.3016 0.3220 4.81e-04 6gbu-a1-m1-cH_6gbu-a1-m1-cD
17 2d1x-a2-m1-cD 59 38 0.2097 0.2203 0.3421 0.008 2d1x-a2-m1-cD_2d1x-a2-m1-cC
18 1ov3-a2-m2-cB 127 62 0.2742 0.1339 0.2742 0.009 1ov3-a2-m2-cB_1ov3-a2-m2-cA
19 1ov3-a2-m2-cA 134 62 0.2742 0.1269 0.2742 0.010 1ov3-a2-m1-cA_1ov3-a2-m2-cA, 1ov3-a2-m2-cB_1ov3-a2-m2-cA
20 1ov3-a2-m1-cA 134 62 0.2742 0.1269 0.2742 0.010 1ov3-a2-m1-cA_1ov3-a2-m2-cA
21 1wyx-a1-m1-cA 68 60 0.3065 0.2794 0.3167 0.010 1wyx-a1-m1-cA_1wyx-a1-m1-cB
22 1wyx-a1-m1-cB 69 60 0.3065 0.2754 0.3167 0.011 1wyx-a1-m1-cA_1wyx-a1-m1-cB
23 2d1x-a2-m1-cC 66 38 0.2097 0.1970 0.3421 0.011 2d1x-a2-m1-cD_2d1x-a2-m1-cC
24 6gbu-a1-m1-cG 54 30 0.2097 0.2407 0.4333 0.037 6gbu-a1-m1-cE_6gbu-a1-m1-cG
25 4iio-a1-m1-cA 63 32 0.2419 0.2381 0.4688 0.048 4iio-a1-m1-cB_4iio-a1-m1-cA
26 4iio-a1-m1-cB 57 32 0.2419 0.2632 0.4688 0.051 4iio-a1-m1-cB_4iio-a1-m1-cA
27 6cq7-a2-m2-cA 73 50 0.2903 0.2466 0.3600 0.054 6cq7-a2-m1-cA_6cq7-a2-m2-cA
28 6cq7-a2-m1-cA 73 50 0.2903 0.2466 0.3600 0.054 6cq7-a2-m1-cA_6cq7-a2-m2-cA
29 6aqb-a1-m2-cB 70 50 0.2903 0.2571 0.3600 0.055 6aqb-a1-m1-cA_6aqb-a1-m2-cB
30 6aqb-a1-m1-cA 70 50 0.2903 0.2571 0.3600 0.055 6aqb-a1-m1-cA_6aqb-a1-m2-cB
31 5k26-a1-m1-cB 75 50 0.2903 0.2400 0.3600 0.064 5k26-a1-m1-cB_5k26-a1-m1-cA
32 5k26-a1-m1-cA 77 50 0.2903 0.2338 0.3600 0.066 5k26-a1-m1-cB_5k26-a1-m1-cA
33 4iim-a1-m1-cA 57 19 0.1774 0.1930 0.5789 0.083 4iim-a1-m1-cB_4iim-a1-m1-cA
34 4iim-a1-m1-cB 55 19 0.1774 0.2000 0.5789 0.092 4iim-a1-m1-cB_4iim-a1-m1-cA
35 3nmz-a1-m1-cD 84 56 0.2581 0.1905 0.2857 0.18 3nmz-a1-m1-cD_3nmz-a1-m1-cC
36 3nmz-a1-m1-cC 85 56 0.2581 0.1882 0.2857 0.18 3nmz-a1-m1-cD_3nmz-a1-m1-cC
37 6gbu-a1-m1-cE 42 13 0.1613 0.2381 0.7692 0.20 6gbu-a1-m1-cE_6gbu-a1-m1-cG
38 2d0n-a1-m1-cC 56 42 0.1935 0.2143 0.2857 0.20 2d0n-a1-m1-cC_2d0n-a1-m1-cA
39 2d0n-a1-m1-cA 59 42 0.1935 0.2034 0.2857 0.22 2d0n-a1-m1-cC_2d0n-a1-m1-cA
40 4jpf-a1-m2-cA 411 25 0.1290 0.0195 0.3200 1.7 4jpf-a1-m1-cA_4jpf-a1-m2-cA
41 4jpf-a1-m1-cA 411 25 0.1290 0.0195 0.3200 1.7 4jpf-a1-m1-cA_4jpf-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600