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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=51)
PVFARELHAQLVQALGDVKRRLLRGGTQQQYQQWQQEADAIEAGNIIEKIK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2q1k-a2-m1-cD 51 51 1.0000 1.0000 1.0000 2.31e-31 2q1k-a2-m1-cC_2q1k-a2-m1-cD
2 2q1k-a2-m1-cC 51 51 1.0000 1.0000 1.0000 2.31e-31 2q1k-a2-m1-cC_2q1k-a2-m1-cD
3 1zw0-a9-m5-cH 66 40 0.3333 0.2576 0.4250 5.17e-06 1zw0-a9-m1-cB_1zw0-a9-m5-cH, 1zw0-a9-m5-cG_1zw0-a9-m5-cH
4 1zw0-a8-m1-cH 66 40 0.3333 0.2576 0.4250 5.17e-06 1zw0-a8-m1-cC_1zw0-a8-m1-cH, 1zw0-a8-m1-cD_1zw0-a8-m1-cH, 1zw0-a8-m3-cB_1zw0-a8-m1-cH
5 1zw0-a8-m1-cD 66 40 0.3333 0.2576 0.4250 5.17e-06 1zw0-a8-m1-cD_1zw0-a8-m1-cH, 1zw0-a8-m1-cG_1zw0-a8-m1-cD
6 1zw0-a6-m6-cH 66 40 0.3333 0.2576 0.4250 5.17e-06 1zw0-a6-m6-cE_1zw0-a6-m6-cH
7 1zw0-a9-m1-cA 65 40 0.3333 0.2615 0.4250 5.18e-06 1zw0-a9-m1-cB_1zw0-a9-m1-cA, 1zw0-a9-m1-cC_1zw0-a9-m1-cA, 1zw0-a9-m9-cF_1zw0-a9-m1-cA
8 1zw0-a7-m7-cE 65 40 0.3333 0.2615 0.4250 5.18e-06 1zw0-a7-m5-cG_1zw0-a7-m7-cE
9 1zw0-a6-m6-cE 65 40 0.3333 0.2615 0.4250 5.18e-06 1zw0-a6-m6-cE_1zw0-a6-m6-cH
10 1zw0-a6-m2-cA 65 40 0.3333 0.2615 0.4250 5.18e-06 1zw0-a6-m1-cB_1zw0-a6-m2-cA
11 1zw0-a9-m1-cB 59 41 0.2549 0.2203 0.3171 1.9 1zw0-a9-m1-cB_1zw0-a9-m1-cA, 1zw0-a9-m1-cB_1zw0-a9-m5-cH
12 1zw0-a8-m3-cB 59 41 0.2549 0.2203 0.3171 1.9 1zw0-a8-m3-cB_1zw0-a8-m1-cH
13 1zw0-a6-m1-cB 59 41 0.2549 0.2203 0.3171 1.9 1zw0-a6-m1-cB_1zw0-a6-m2-cA
14 4boq-a1-m2-cA 175 35 0.2353 0.0686 0.3429 5.0 4boq-a1-m1-cA_4boq-a1-m2-cA
15 4boq-a1-m1-cA 175 35 0.2353 0.0686 0.3429 5.0 4boq-a1-m1-cA_4boq-a1-m2-cA
16 4bos-a1-m1-cB 164 35 0.2353 0.0732 0.3429 5.2 4bos-a1-m1-cA_4bos-a1-m1-cB
17 4bos-a1-m1-cA 164 35 0.2353 0.0732 0.3429 5.2 4bos-a1-m1-cA_4bos-a1-m1-cB
18 5ykr-a1-m1-cB 452 29 0.2157 0.0243 0.3793 9.6 5ykr-a1-m1-cA_5ykr-a1-m1-cB
19 5ykr-a1-m1-cA 452 29 0.2157 0.0243 0.3793 9.6 5ykr-a1-m1-cA_5ykr-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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