Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=58)
PVLIVYGPKLDVGKKREFVERLTSVAAEIYGMDRSAITILIHEPPAENVGVGGKLIAD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3m20-a1-m2-cC 58 58 1.0000 1.0000 1.0000 1.19e-36 3m20-a1-m1-cB_3m20-a1-m2-cC, 3m20-a1-m2-cB_3m20-a1-m2-cC
2 3m20-a1-m2-cB 58 58 1.0000 1.0000 1.0000 1.19e-36 3m20-a1-m2-cB_3m20-a1-m2-cC
3 3m20-a1-m1-cB 58 58 1.0000 1.0000 1.0000 1.19e-36 3m20-a1-m1-cB_3m20-a1-m2-cC
4 4faz-a1-m2-cC 62 40 0.2414 0.2258 0.3500 2.70e-04 4faz-a1-m1-cB_4faz-a1-m2-cC, 4faz-a1-m2-cB_4faz-a1-m2-cC
5 4faz-a1-m2-cB 62 40 0.2414 0.2258 0.3500 2.70e-04 4faz-a1-m2-cB_4faz-a1-m2-cC
6 4faz-a1-m1-cB 62 40 0.2414 0.2258 0.3500 2.70e-04 4faz-a1-m1-cB_4faz-a1-m2-cC
7 6blm-a1-m1-cC 127 59 0.3448 0.1575 0.3390 4.22e-04 6blm-a1-m1-cA_6blm-a1-m1-cC, 6blm-a1-m1-cB_6blm-a1-m1-cC
8 6blm-a1-m1-cC 127 41 0.1724 0.0787 0.2439 3.0 6blm-a1-m1-cA_6blm-a1-m1-cC, 6blm-a1-m1-cB_6blm-a1-m1-cC
9 6blm-a1-m1-cB 127 59 0.3448 0.1575 0.3390 4.22e-04 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cB_6blm-a1-m1-cC
10 6blm-a1-m1-cB 127 41 0.1724 0.0787 0.2439 3.0 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cB_6blm-a1-m1-cC
11 6blm-a1-m1-cA 127 59 0.3448 0.1575 0.3390 4.22e-04 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cA_6blm-a1-m1-cC
12 6blm-a1-m1-cA 127 41 0.1724 0.0787 0.2439 3.0 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cA_6blm-a1-m1-cC
13 6vvn-a1-m1-cC 123 56 0.3448 0.1626 0.3571 4.54e-04 6vvn-a1-m1-cA_6vvn-a1-m1-cC, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
14 6vvn-a1-m1-cB 123 56 0.3448 0.1626 0.3571 4.54e-04 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
15 6vvn-a1-m1-cA 123 56 0.3448 0.1626 0.3571 4.54e-04 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cA_6vvn-a1-m1-cC
16 3abf-a1-m1-cE 61 45 0.2586 0.2459 0.3333 0.001 3abf-a1-m1-cE_3abf-a1-m1-cC
17 3abf-a1-m1-cD 62 45 0.2586 0.2419 0.3333 0.001 3abf-a1-m1-cD_3abf-a1-m1-cC
18 3abf-a1-m1-cC 63 45 0.2586 0.2381 0.3333 0.002 3abf-a1-m1-cD_3abf-a1-m1-cC, 3abf-a1-m1-cE_3abf-a1-m1-cC
19 7xuy-a1-m6-cA 64 40 0.2241 0.2031 0.3250 0.004 7xuy-a1-m3-cA_7xuy-a1-m6-cA, 7xuy-a1-m5-cA_7xuy-a1-m6-cA
20 7xuy-a1-m5-cA 64 40 0.2241 0.2031 0.3250 0.004 7xuy-a1-m5-cA_7xuy-a1-m6-cA
21 7xuy-a1-m3-cA 64 40 0.2241 0.2031 0.3250 0.004 7xuy-a1-m3-cA_7xuy-a1-m6-cA
22 2opa-a1-m3-cB 61 45 0.2414 0.2295 0.3111 0.013 2opa-a1-m2-cB_2opa-a1-m3-cB, 2opa-a1-m3-cA_2opa-a1-m3-cB
23 2opa-a1-m3-cA 61 45 0.2414 0.2295 0.3111 0.013 2opa-a1-m3-cA_2opa-a1-m3-cB
24 2opa-a1-m2-cB 61 45 0.2414 0.2295 0.3111 0.013 2opa-a1-m2-cB_2opa-a1-m3-cB
25 6vvm-a1-m1-cC 123 55 0.3103 0.1463 0.3273 0.017 6vvm-a1-m1-cA_6vvm-a1-m1-cC, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
26 6vvm-a1-m1-cB 123 55 0.3103 0.1463 0.3273 0.017 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
27 6vvm-a1-m1-cA 123 55 0.3103 0.1463 0.3273 0.017 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cA_6vvm-a1-m1-cC
28 3ry0-a1-m3-cA 65 39 0.2414 0.2154 0.3590 0.057 3ry0-a1-m3-cB_3ry0-a1-m3-cA
29 3ry0-a1-m3-cB 63 39 0.2414 0.2222 0.3590 0.059 3ry0-a1-m2-cB_3ry0-a1-m3-cB, 3ry0-a1-m3-cB_3ry0-a1-m3-cA
30 3ry0-a1-m2-cB 63 39 0.2414 0.2222 0.3590 0.059 3ry0-a1-m2-cB_3ry0-a1-m3-cB
31 3m21-a1-m1-cC 63 41 0.1552 0.1429 0.2195 0.10 3m21-a1-m1-cC_3m21-a1-m1-cD
32 3m21-a1-m1-cF 67 43 0.1552 0.1343 0.2093 0.13 3m21-a1-m1-cB_3m21-a1-m1-cF
33 3m21-a1-m1-cD 66 43 0.1552 0.1364 0.2093 0.13 3m21-a1-m1-cC_3m21-a1-m1-cD
34 3m21-a1-m1-cB 66 43 0.1552 0.1364 0.2093 0.13 3m21-a1-m1-cB_3m21-a1-m1-cF
35 3d7q-a2-m2-cA 104 47 0.2414 0.1346 0.2979 0.22 3d7q-a2-m1-cA_3d7q-a2-m2-cA
36 3d7q-a2-m1-cA 104 47 0.2414 0.1346 0.2979 0.22 3d7q-a2-m1-cA_3d7q-a2-m2-cA
37 7m58-a1-m1-cC 143 43 0.2069 0.0839 0.2791 0.44 7m58-a1-m1-cB_7m58-a1-m1-cC
38 7m58-a1-m1-cB 143 43 0.2069 0.0839 0.2791 0.44 7m58-a1-m1-cB_7m58-a1-m1-cC
39 7c90-a1-m1-cC 145 34 0.2241 0.0897 0.3824 0.62 7c90-a1-m1-cC_7c90-a1-m1-cD
40 4u5p-a1-m1-cC 141 40 0.2069 0.0851 0.3000 0.81 4u5p-a1-m1-cB_4u5p-a1-m1-cC
41 4u5p-a1-m1-cB 141 40 0.2069 0.0851 0.3000 0.81 4u5p-a1-m1-cB_4u5p-a1-m1-cC
42 2j1p-a1-m1-cA 270 35 0.2241 0.0481 0.3714 2.1 2j1p-a1-m1-cA_2j1p-a1-m1-cB
43 2j1p-a1-m1-cB 271 35 0.2241 0.0480 0.3714 2.2 2j1p-a1-m1-cA_2j1p-a1-m1-cB
44 5xn5-a1-m1-cA 288 39 0.2586 0.0521 0.3846 3.1 5xn5-a1-m1-cB_5xn5-a1-m1-cA
45 5xn5-a1-m1-cB 281 39 0.2586 0.0534 0.3846 3.1 5xn5-a1-m1-cB_5xn5-a1-m1-cA
46 3nvq-a1-m1-cE 588 17 0.1552 0.0153 0.5294 4.5 3nvq-a1-m1-cA_3nvq-a1-m1-cE
47 3nvq-a1-m1-cA 588 17 0.1552 0.0153 0.5294 4.5 3nvq-a1-m1-cA_3nvq-a1-m1-cE
48 5unq-a1-m1-cF 123 36 0.1552 0.0732 0.2500 6.2 5unq-a1-m1-cA_5unq-a1-m1-cF
49 5unq-a1-m1-cA 123 36 0.1552 0.0732 0.2500 6.2 5unq-a1-m1-cA_5unq-a1-m1-cF
50 3qyj-a3-m2-cB 290 47 0.2241 0.0448 0.2766 6.4 3qyj-a3-m2-cB_3qyj-a3-m1-cA
51 3qyj-a3-m1-cA 291 47 0.2241 0.0447 0.2766 6.4 3qyj-a3-m2-cB_3qyj-a3-m1-cA
52 2yjn-a1-m2-cA 408 50 0.2931 0.0417 0.3400 8.3 2yjn-a1-m1-cA_2yjn-a1-m2-cA
53 2yjn-a1-m1-cA 408 50 0.2931 0.0417 0.3400 8.3 2yjn-a1-m1-cA_2yjn-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600