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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=63)
PVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSGASWSDIGKS
MGV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8ada-a1-m1-cA 69 63 1.0000 0.9130 1.0000 2.53e-40 8ada-a1-m1-cB_8ada-a1-m1-cA
2 8ada-a1-m1-cB 63 63 1.0000 1.0000 1.0000 4.73e-40 8ada-a1-m1-cB_8ada-a1-m1-cA
3 2g3f-a3-m2-cB 414 29 0.1905 0.0290 0.4138 1.8 2g3f-a3-m1-cA_2g3f-a3-m2-cB
4 2g3f-a3-m1-cA 414 29 0.1905 0.0290 0.4138 1.8 2g3f-a3-m1-cA_2g3f-a3-m2-cB
5 7p5j-a1-m1-cB 399 31 0.2063 0.0326 0.4194 2.1 7p5j-a1-m1-cA_7p5j-a1-m1-cB
6 7p5j-a1-m1-cA 399 31 0.2063 0.0326 0.4194 2.1 7p5j-a1-m1-cA_7p5j-a1-m1-cB
7 3v4h-a2-m6-cA 131 31 0.1429 0.0687 0.2903 2.3 3v4h-a2-m6-cB_3v4h-a2-m6-cA
8 3v4h-a2-m3-cA 131 31 0.1429 0.0687 0.2903 2.3 3v4h-a2-m6-cB_3v4h-a2-m3-cA
9 1sqi-a1-m1-cB 342 21 0.1429 0.0263 0.4286 3.1 1sqi-a1-m1-cB_1sqi-a1-m1-cA
10 1sqi-a1-m1-cA 343 21 0.1429 0.0262 0.4286 3.1 1sqi-a1-m1-cB_1sqi-a1-m1-cA
11 5iz2-a1-m1-cA 119 23 0.1587 0.0840 0.4348 3.6 5iz2-a1-m1-cA_5iz2-a1-m1-cB
12 5iz2-a1-m1-cB 126 23 0.1587 0.0794 0.4348 3.8 5iz2-a1-m1-cA_5iz2-a1-m1-cB
13 1om7-a2-m3-cA 453 34 0.2063 0.0287 0.3824 5.5 1om7-a2-m2-cA_1om7-a2-m3-cA
14 1om7-a2-m2-cA 453 34 0.2063 0.0287 0.3824 5.5 1om7-a2-m2-cA_1om7-a2-m3-cA
15 5wch-a1-m1-cD 330 46 0.2540 0.0485 0.3478 5.7 5wch-a1-m1-cD_5wch-a1-m1-cA, 5wch-a1-m1-cD_5wch-a1-m1-cC
16 5wch-a1-m1-cC 342 46 0.2540 0.0468 0.3478 5.7 5wch-a1-m1-cD_5wch-a1-m1-cC
17 4bjp-a1-m2-cA 409 41 0.2222 0.0342 0.3415 5.9 4bjp-a1-m1-cA_4bjp-a1-m2-cA
18 4bjp-a1-m1-cA 409 41 0.2222 0.0342 0.3415 5.9 4bjp-a1-m1-cA_4bjp-a1-m2-cA
19 4jo0-a1-m2-cA 522 17 0.1429 0.0172 0.5294 5.9 4jo0-a1-m1-cA_4jo0-a1-m2-cA
20 4jo0-a1-m1-cA 522 17 0.1429 0.0172 0.5294 5.9 4jo0-a1-m1-cA_4jo0-a1-m2-cA
21 7yxx-a1-m1-cC 1741 46 0.2540 0.0092 0.3478 6.0 7yxx-a1-m1-cC_7yxx-a1-m1-cA, 7yxx-a1-m1-cC_7yxx-a1-m1-cB
22 7yxx-a1-m1-cB 1754 46 0.2540 0.0091 0.3478 6.0 7yxx-a1-m1-cC_7yxx-a1-m1-cB
23 7yxx-a1-m1-cA 1754 46 0.2540 0.0091 0.3478 6.0 7yxx-a1-m1-cC_7yxx-a1-m1-cA
24 5wch-a1-m1-cA 350 46 0.2540 0.0457 0.3478 6.0 5wch-a1-m1-cD_5wch-a1-m1-cA
25 2avw-a2-m1-cD 296 24 0.1587 0.0338 0.4167 8.1 2avw-a2-m1-cC_2avw-a2-m1-cD
26 7bv3-a1-m1-cA 457 24 0.1429 0.0197 0.3750 8.2 7bv3-a1-m1-cB_7bv3-a1-m1-cA
27 7bv3-a1-m1-cB 439 24 0.1429 0.0205 0.3750 8.6 7bv3-a1-m1-cB_7bv3-a1-m1-cA
28 2avw-a2-m1-cC 289 24 0.1587 0.0346 0.4167 9.0 2avw-a2-m1-cC_2avw-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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