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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
PVVKINAIEVPAGAGPELEKRFAHSAHAVENSPGFLGFQLLRPVKGEERYFVVTHWESDE
AFQAWANGPAIAAHAGHRANPVATGASLLEFEVVLD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ple-a1-m1-cB 96 96 1.0000 1.0000 1.0000 8.31e-66 6ple-a1-m1-cA_6ple-a1-m1-cB
2 6ple-a1-m1-cA 96 96 1.0000 1.0000 1.0000 8.31e-66 6ple-a1-m1-cA_6ple-a1-m1-cB
3 6ds7-a1-m1-cB 99 96 1.0000 0.9697 1.0000 1.09e-65 6ds7-a1-m1-cA_6ds7-a1-m1-cB
4 6ds7-a1-m1-cA 99 96 1.0000 0.9697 1.0000 1.09e-65 6ds7-a1-m1-cA_6ds7-a1-m1-cB
5 4nl5-a2-m2-cB 100 96 0.9896 0.9500 0.9896 5.05e-65 4nl5-a2-m2-cB_4nl5-a2-m1-cA
6 4nl5-a2-m1-cA 101 96 0.9896 0.9406 0.9896 5.16e-65 4nl5-a2-m2-cB_4nl5-a2-m1-cA
7 5uq4-a1-m1-cB 90 96 0.8646 0.9222 0.8646 1.88e-52 5uq4-a1-m1-cA_5uq4-a1-m1-cB
8 5uq4-a1-m1-cA 86 96 0.8542 0.9535 0.8542 1.67e-51 5uq4-a1-m1-cA_5uq4-a1-m1-cB
9 1iuj-a2-m2-cA 102 98 0.3958 0.3725 0.3878 4.65e-13 1iuj-a2-m1-cA_1iuj-a2-m2-cA, 1iuj-a2-m2-cA_1iuj-a2-m2-cB
10 1iuj-a2-m1-cA 102 98 0.3958 0.3725 0.3878 4.65e-13 1iuj-a2-m1-cA_1iuj-a2-m2-cA, 1iuj-a2-m1-cA_1iuj-a2-m2-cB
11 1iuj-a2-m2-cB 103 98 0.3958 0.3689 0.3878 5.36e-13 1iuj-a2-m1-cA_1iuj-a2-m2-cB, 1iuj-a2-m2-cA_1iuj-a2-m2-cB
12 7bio-a1-m1-cA 106 62 0.1771 0.1604 0.2742 1.18e-04 7bio-a1-m1-cA_7bio-a1-m1-cB
13 7bio-a1-m1-cB 111 62 0.1771 0.1532 0.2742 2.01e-04 7bio-a1-m1-cA_7bio-a1-m1-cB
14 1xbw-a2-m1-cD 98 70 0.1771 0.1735 0.2429 0.004 1xbw-a2-m1-cC_1xbw-a2-m1-cD
15 1xbw-a2-m1-cC 90 80 0.1979 0.2111 0.2375 0.004 1xbw-a2-m1-cC_1xbw-a2-m1-cD
16 3kg0-a3-m2-cA 97 63 0.2083 0.2062 0.3175 0.007 3kg0-a3-m1-cC_3kg0-a3-m2-cA
17 3kg0-a3-m1-cC 97 63 0.2083 0.2062 0.3175 0.007 3kg0-a3-m1-cC_3kg0-a3-m2-cA
18 3lgn-a1-m1-cB 109 83 0.2083 0.1835 0.2410 0.008 3lgn-a1-m1-cB_3lgn-a1-m1-cA
19 3lgn-a1-m1-cA 110 83 0.2083 0.1818 0.2410 0.009 3lgn-a1-m1-cB_3lgn-a1-m1-cA
20 2zdo-a2-m1-cD 109 72 0.1771 0.1560 0.2361 0.016 2zdo-a2-m1-cC_2zdo-a2-m1-cD
21 2zdo-a2-m1-cC 108 72 0.1771 0.1574 0.2361 0.016 2zdo-a2-m1-cC_2zdo-a2-m1-cD
22 1tz0-a1-m1-cA 106 81 0.2188 0.1981 0.2593 0.031 1tz0-a1-m1-cC_1tz0-a1-m1-cA
23 1tz0-a1-m1-cC 99 64 0.1771 0.1717 0.2656 0.53 1tz0-a1-m1-cC_1tz0-a1-m1-cA
24 3bm7-a1-m2-cA 102 56 0.1979 0.1863 0.3393 1.1 3bm7-a1-m1-cA_3bm7-a1-m2-cA
25 3bm7-a1-m1-cA 102 56 0.1979 0.1863 0.3393 1.1 3bm7-a1-m1-cA_3bm7-a1-m2-cA
26 5w25-a3-m1-cB 566 40 0.1562 0.0265 0.3750 3.8 5w25-a3-m1-cB_5w25-a3-m1-cA
27 4rmf-a1-m2-cA 579 40 0.1562 0.0259 0.3750 4.1 4rmf-a1-m1-cA_4rmf-a1-m2-cA
28 4rmf-a1-m1-cA 579 40 0.1562 0.0259 0.3750 4.1 4rmf-a1-m1-cA_4rmf-a1-m2-cA
29 5w25-a3-m1-cA 583 40 0.1562 0.0257 0.3750 4.2 5w25-a3-m1-cB_5w25-a3-m1-cA
30 3dz8-a1-m2-cA 178 38 0.1146 0.0618 0.2895 8.0 3dz8-a1-m1-cA_3dz8-a1-m2-cA
31 3dz8-a1-m1-cA 178 38 0.1146 0.0618 0.2895 8.0 3dz8-a1-m1-cA_3dz8-a1-m2-cA
32 7opq-a1-m1-cA 212 45 0.1250 0.0566 0.2667 8.3 7opq-a1-m1-cB_7opq-a1-m1-cA
33 7opq-a1-m1-cB 204 45 0.1250 0.0588 0.2667 8.5 7opq-a1-m1-cB_7opq-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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