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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
PVWTALFDYEPSGQDELALRKGDRVEVLSRDAAISGDEGWWAGQVGGQVGIFPSNYVSRG
GGAPPIPPPR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6aqb-a1-m2-cB 70 70 1.0000 1.0000 1.0000 1.27e-45 6aqb-a1-m1-cA_6aqb-a1-m2-cB
2 6aqb-a1-m1-cA 70 70 1.0000 1.0000 1.0000 1.27e-45 6aqb-a1-m1-cA_6aqb-a1-m2-cB
3 5k26-a1-m1-cA 77 68 0.9286 0.8442 0.9559 3.11e-41 5k26-a1-m1-cB_5k26-a1-m1-cA
4 5k26-a1-m1-cB 75 68 0.9286 0.8667 0.9559 3.58e-41 5k26-a1-m1-cB_5k26-a1-m1-cA
5 6cq7-a2-m2-cA 73 59 0.8429 0.8082 1.0000 5.99e-38 6cq7-a2-m1-cA_6cq7-a2-m2-cA
6 6cq7-a2-m1-cA 73 59 0.8429 0.8082 1.0000 5.99e-38 6cq7-a2-m1-cA_6cq7-a2-m2-cA
7 2sem-a1-m1-cB 59 54 0.3429 0.4068 0.4444 1.05e-11 2sem-a1-m1-cA_2sem-a1-m1-cB
8 2sem-a1-m1-cA 58 54 0.3429 0.4138 0.4444 1.25e-11 2sem-a1-m1-cA_2sem-a1-m1-cB
9 2d0n-a1-m1-cC 56 54 0.3286 0.4107 0.4259 2.16e-10 2d0n-a1-m1-cC_2d0n-a1-m1-cA
10 2d0n-a1-m1-cA 59 54 0.3286 0.3898 0.4259 2.73e-10 2d0n-a1-m1-cC_2d0n-a1-m1-cA
11 6a9c-a1-m1-cA 59 55 0.3000 0.3559 0.3818 9.43e-09 6a9c-a1-m1-cA_6a9c-a1-m1-cB
12 6a9c-a1-m1-cB 66 55 0.3000 0.3182 0.3818 1.19e-08 6a9c-a1-m1-cA_6a9c-a1-m1-cB
13 5sxp-a2-m1-cD 60 53 0.3000 0.3500 0.3962 1.61e-08 5sxp-a2-m1-cD_5sxp-a2-m1-cB
14 5sxp-a2-m1-cB 61 53 0.3000 0.3443 0.3962 1.70e-08 5sxp-a2-m1-cD_5sxp-a2-m1-cB
15 2p4r-a2-m2-cA 55 53 0.3000 0.3818 0.3962 4.26e-08 2p4r-a2-m1-cA_2p4r-a2-m2-cA
16 2p4r-a2-m1-cA 55 53 0.3000 0.3818 0.3962 4.26e-08 2p4r-a2-m1-cA_2p4r-a2-m2-cA
17 2ak5-a1-m2-cA 60 53 0.3000 0.3500 0.3962 4.55e-08 2ak5-a1-m2-cA_2ak5-a1-m2-cB
18 2ak5-a1-m2-cB 64 53 0.3000 0.3281 0.3962 4.70e-08 2ak5-a1-m2-cA_2ak5-a1-m2-cB
19 2esw-a3-m1-cB 57 53 0.3000 0.3684 0.3962 4.90e-08 2esw-a3-m1-cB_2esw-a3-m1-cA
20 2esw-a3-m1-cA 60 53 0.3000 0.3500 0.3962 5.78e-08 2esw-a3-m1-cB_2esw-a3-m1-cA
21 7pvz-a1-m1-cB 60 60 0.3143 0.3667 0.3667 1.18e-07 7pvz-a1-m1-cA_7pvz-a1-m1-cB
22 7pvz-a1-m1-cA 60 60 0.3143 0.3667 0.3667 1.18e-07 7pvz-a1-m1-cA_7pvz-a1-m1-cB
23 6gbu-a1-m1-cG 54 54 0.2857 0.3704 0.3704 1.56e-07 6gbu-a1-m1-cE_6gbu-a1-m1-cG
24 2d1x-a2-m1-cD 59 55 0.2857 0.3390 0.3636 2.21e-07 2d1x-a2-m1-cD_2d1x-a2-m1-cC
25 1shf-a1-m2-cB 59 60 0.2857 0.3390 0.3333 2.39e-07 1shf-a1-m2-cA_1shf-a1-m2-cB
26 1shf-a1-m2-cA 59 60 0.2857 0.3390 0.3333 2.39e-07 1shf-a1-m2-cA_1shf-a1-m2-cB
27 2d1x-a2-m1-cC 66 55 0.2857 0.3030 0.3636 3.04e-07 2d1x-a2-m1-cD_2d1x-a2-m1-cC
28 1wyx-a1-m1-cB 69 51 0.3143 0.3188 0.4314 7.91e-07 1wyx-a1-m1-cA_1wyx-a1-m1-cB
29 1wyx-a1-m1-cA 68 51 0.3143 0.3235 0.4314 8.09e-07 1wyx-a1-m1-cA_1wyx-a1-m1-cB
30 4le9-a1-m2-cA 59 59 0.3000 0.3559 0.3559 8.11e-07 4le9-a1-m1-cA_4le9-a1-m2-cA
31 4le9-a1-m1-cA 59 59 0.3000 0.3559 0.3559 8.11e-07 4le9-a1-m1-cA_4le9-a1-m2-cA
32 1jqq-a1-m1-cD 73 56 0.2857 0.2740 0.3571 1.04e-06 1jqq-a1-m1-cC_1jqq-a1-m1-cD, 1jqq-a1-m1-cD_1jqq-a1-m1-cA
33 1jqq-a1-m1-cB 82 56 0.2857 0.2439 0.3571 1.38e-06 1jqq-a1-m1-cA_1jqq-a1-m1-cB
34 1jqq-a1-m1-cA 79 56 0.2857 0.2532 0.3571 1.38e-06 1jqq-a1-m1-cA_1jqq-a1-m1-cB, 1jqq-a1-m1-cD_1jqq-a1-m1-cA
35 1jqq-a1-m1-cC 70 55 0.2857 0.2857 0.3636 1.73e-06 1jqq-a1-m1-cC_1jqq-a1-m1-cD
36 2hda-a3-m3-cA 59 60 0.2857 0.3390 0.3333 2.46e-06 2hda-a3-m2-cA_2hda-a3-m3-cA
37 2hda-a3-m2-cA 59 60 0.2857 0.3390 0.3333 2.46e-06 2hda-a3-m2-cA_2hda-a3-m3-cA
38 2hda-a2-m6-cA 59 60 0.2857 0.3390 0.3333 2.46e-06 2hda-a2-m2-cA_2hda-a2-m6-cA
39 2hda-a2-m2-cA 59 60 0.2857 0.3390 0.3333 2.46e-06 2hda-a2-m2-cA_2hda-a2-m6-cA
40 1bu1-a1-m1-cC 56 58 0.3143 0.3929 0.3793 2.26e-05 1bu1-a1-m1-cC_1bu1-a1-m1-cE
41 1bu1-a1-m1-cE 57 58 0.3143 0.3860 0.3793 2.49e-05 1bu1-a1-m1-cC_1bu1-a1-m1-cE
42 1x27-a1-m1-cF 163 65 0.3286 0.1411 0.3538 2.53e-05 1x27-a1-m1-cA_1x27-a1-m1-cF, 1x27-a1-m1-cD_1x27-a1-m1-cF
43 1x27-a1-m1-cD 163 65 0.3286 0.1411 0.3538 2.53e-05 1x27-a1-m1-cD_1x27-a1-m1-cF
44 1x27-a1-m1-cA 163 65 0.3286 0.1411 0.3538 2.53e-05 1x27-a1-m1-cA_1x27-a1-m1-cF
45 4xi2-a1-m2-cA 421 57 0.3000 0.0499 0.3684 3.13e-05 4xi2-a1-m1-cA_4xi2-a1-m2-cA
46 4xi2-a1-m1-cA 421 57 0.3000 0.0499 0.3684 3.13e-05 4xi2-a1-m1-cA_4xi2-a1-m2-cA
47 2iim-a1-m2-cA 62 57 0.3000 0.3387 0.3684 1.35e-04 2iim-a1-m1-cA_2iim-a1-m2-cA
48 2iim-a1-m1-cA 62 57 0.3000 0.3387 0.3684 1.35e-04 2iim-a1-m1-cA_2iim-a1-m2-cA
49 4u5w-a1-m1-cB 163 60 0.3143 0.1350 0.3667 1.37e-04 4u5w-a1-m1-cD_4u5w-a1-m1-cB
50 1ov3-a2-m2-cB 127 56 0.2571 0.1417 0.3214 1.44e-04 1ov3-a2-m2-cB_1ov3-a2-m2-cA
51 1ov3-a2-m2-cB 127 58 0.2429 0.1339 0.2931 0.029 1ov3-a2-m2-cB_1ov3-a2-m2-cA
52 4u5w-a1-m1-cD 160 60 0.3143 0.1375 0.3667 1.46e-04 4u5w-a1-m1-cD_4u5w-a1-m1-cB
53 1ov3-a2-m2-cA 134 56 0.2571 0.1343 0.3214 1.61e-04 1ov3-a2-m1-cA_1ov3-a2-m2-cA, 1ov3-a2-m2-cB_1ov3-a2-m2-cA
54 1ov3-a2-m2-cA 134 58 0.2429 0.1269 0.2931 0.030 1ov3-a2-m1-cA_1ov3-a2-m2-cA, 1ov3-a2-m2-cB_1ov3-a2-m2-cA
55 1ov3-a2-m1-cA 134 56 0.2571 0.1343 0.3214 1.61e-04 1ov3-a2-m1-cA_1ov3-a2-m2-cA
56 1ov3-a2-m1-cA 134 58 0.2429 0.1269 0.2931 0.030 1ov3-a2-m1-cA_1ov3-a2-m2-cA
57 4iim-a1-m1-cA 57 54 0.2571 0.3158 0.3333 3.42e-04 4iim-a1-m1-cB_4iim-a1-m1-cA
58 4iim-a1-m1-cB 55 54 0.2571 0.3273 0.3333 3.43e-04 4iim-a1-m1-cB_4iim-a1-m1-cA
59 2hck-a1-m1-cB 437 57 0.3143 0.0503 0.3860 3.70e-04 2hck-a1-m1-cA_2hck-a1-m1-cB
60 2hck-a1-m1-cA 437 57 0.3143 0.0503 0.3860 3.70e-04 2hck-a1-m1-cA_2hck-a1-m1-cB
61 1z9z-a5-m5-cB 60 53 0.2571 0.3000 0.3396 5.66e-04 1z9z-a5-m1-cB_1z9z-a5-m5-cB
62 1z9z-a5-m1-cB 60 53 0.2571 0.3000 0.3396 5.66e-04 1z9z-a5-m1-cB_1z9z-a5-m5-cB
63 1z9z-a4-m4-cB 60 53 0.2571 0.3000 0.3396 5.66e-04 1z9z-a4-m1-cA_1z9z-a4-m4-cB
64 1z9z-a4-m1-cA 60 53 0.2571 0.3000 0.3396 5.66e-04 1z9z-a4-m1-cA_1z9z-a4-m4-cB
65 1abq-a1-m2-cA 56 57 0.2571 0.3214 0.3158 7.32e-04 1abq-a1-m1-cA_1abq-a1-m2-cA
66 1abq-a1-m1-cA 56 57 0.2571 0.3214 0.3158 7.32e-04 1abq-a1-m1-cA_1abq-a1-m2-cA
67 1bb9-a1-m2-cA 83 65 0.3000 0.2530 0.3231 8.01e-04 1bb9-a1-m1-cA_1bb9-a1-m2-cA
68 1bb9-a1-m1-cA 83 65 0.3000 0.2530 0.3231 8.01e-04 1bb9-a1-m1-cA_1bb9-a1-m2-cA
69 6gbu-a1-m1-cE 42 50 0.2429 0.4048 0.3400 0.001 6gbu-a1-m1-cE_6gbu-a1-m1-cG
70 7dpa-a1-m1-cD 1642 56 0.2857 0.0122 0.3571 0.002 7dpa-a1-m1-cA_7dpa-a1-m1-cD
71 7dpa-a1-m1-cA 1642 56 0.2857 0.0122 0.3571 0.002 7dpa-a1-m1-cA_7dpa-a1-m1-cD
72 4iio-a1-m1-cB 57 54 0.2571 0.3158 0.3333 0.002 4iio-a1-m1-cB_4iio-a1-m1-cA
73 4iio-a1-m1-cA 63 54 0.2571 0.2857 0.3333 0.003 4iio-a1-m1-cB_4iio-a1-m1-cA
74 1opl-a3-m2-cA 451 57 0.2571 0.0399 0.3158 0.004 1opl-a3-m1-cA_1opl-a3-m2-cA
75 1opl-a3-m1-cA 451 57 0.2571 0.0399 0.3158 0.004 1opl-a3-m1-cA_1opl-a3-m2-cA
76 3eg1-a1-m1-cB 56 57 0.2429 0.3036 0.2982 0.007 3eg1-a1-m1-cB_3eg1-a1-m1-cA
77 3eg1-a1-m1-cA 58 57 0.2429 0.2931 0.2982 0.008 3eg1-a1-m1-cB_3eg1-a1-m1-cA
78 2oaw-a5-m4-cD 65 63 0.2571 0.2769 0.2857 0.008 2oaw-a5-m1-cB_2oaw-a5-m4-cD, 2oaw-a5-m3-cC_2oaw-a5-m4-cD
79 2oaw-a5-m3-cC 65 63 0.2571 0.2769 0.2857 0.008 2oaw-a5-m3-cC_2oaw-a5-m4-cD
80 2oaw-a5-m1-cB 65 63 0.2571 0.2769 0.2857 0.008 2oaw-a5-m1-cB_2oaw-a5-m4-cD
81 3nmz-a1-m1-cD 84 53 0.2429 0.2024 0.3208 0.011 3nmz-a1-m1-cD_3nmz-a1-m1-cC
82 3nmz-a1-m1-cC 85 53 0.2429 0.2000 0.3208 0.011 3nmz-a1-m1-cD_3nmz-a1-m1-cC
83 6gbu-a1-m1-cH 63 56 0.2286 0.2540 0.2857 0.042 6gbu-a1-m1-cH_6gbu-a1-m1-cD
84 6gbu-a1-m1-cD 64 56 0.2286 0.2500 0.2857 0.044 6gbu-a1-m1-cH_6gbu-a1-m1-cD
85 1k9a-a7-m2-cD 433 59 0.2429 0.0393 0.2881 0.047 1k9a-a7-m2-cD_1k9a-a7-m1-cC
86 1k9a-a7-m1-cC 438 59 0.2429 0.0388 0.2881 0.056 1k9a-a7-m2-cD_1k9a-a7-m1-cC
87 2bzy-a1-m1-cB 62 50 0.2571 0.2903 0.3600 0.065 2bzy-a1-m1-cA_2bzy-a1-m1-cB
88 2bzy-a1-m1-cA 62 50 0.2571 0.2903 0.3600 0.065 2bzy-a1-m1-cA_2bzy-a1-m1-cB
89 1cs1-a1-m1-cD 383 34 0.1571 0.0287 0.3235 4.0 1cs1-a1-m1-cA_1cs1-a1-m1-cD, 1cs1-a1-m1-cB_1cs1-a1-m1-cD, 1cs1-a1-m1-cC_1cs1-a1-m1-cD
90 1cs1-a1-m1-cC 383 34 0.1571 0.0287 0.3235 4.0 1cs1-a1-m1-cC_1cs1-a1-m1-cD
91 1cs1-a1-m1-cB 383 34 0.1571 0.0287 0.3235 4.0 1cs1-a1-m1-cB_1cs1-a1-m1-cD
92 1cs1-a1-m1-cA 383 34 0.1571 0.0287 0.3235 4.0 1cs1-a1-m1-cA_1cs1-a1-m1-cD
93 1sq1-a1-m4-cA 281 16 0.1429 0.0356 0.6250 8.1 1sq1-a1-m1-cA_1sq1-a1-m4-cA, 1sq1-a1-m2-cA_1sq1-a1-m4-cA, 1sq1-a1-m3-cA_1sq1-a1-m4-cA
94 1sq1-a1-m3-cA 281 16 0.1429 0.0356 0.6250 8.1 1sq1-a1-m3-cA_1sq1-a1-m4-cA
95 1sq1-a1-m2-cA 281 16 0.1429 0.0356 0.6250 8.1 1sq1-a1-m2-cA_1sq1-a1-m4-cA
96 1sq1-a1-m1-cA 281 16 0.1429 0.0356 0.6250 8.1 1sq1-a1-m1-cA_1sq1-a1-m4-cA

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Reference:
Jacob Schwartz et al.

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