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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=58)
PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGTETAYGLLTAEASAVWGCDTCAD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2yyr-a1-m1-cB 58 58 1.0000 1.0000 1.0000 1.42e-38 2yyr-a1-m1-cA_2yyr-a1-m1-cB
2 2yyr-a1-m1-cA 58 58 1.0000 1.0000 1.0000 1.42e-38 2yyr-a1-m1-cA_2yyr-a1-m1-cB
3 3gl6-a1-m2-cA 52 29 0.1724 0.1923 0.3448 0.034 3gl6-a1-m1-cA_3gl6-a1-m2-cA
4 3gl6-a1-m1-cA 52 29 0.1724 0.1923 0.3448 0.034 3gl6-a1-m1-cA_3gl6-a1-m2-cA
5 3kv5-a3-m2-cD 445 51 0.2414 0.0315 0.2745 2.1 3kv5-a3-m2-cD_3kv5-a3-m1-cA
6 3kv5-a3-m1-cA 447 51 0.2414 0.0313 0.2745 2.1 3kv5-a3-m2-cD_3kv5-a3-m1-cA
7 3mkc-a4-m7-cA 371 44 0.2931 0.0458 0.3864 2.1 3mkc-a4-m1-cA_3mkc-a4-m7-cA
8 3mkc-a4-m1-cA 371 44 0.2931 0.0458 0.3864 2.1 3mkc-a4-m1-cA_3mkc-a4-m7-cA
9 3mkc-a3-m6-cA 371 44 0.2931 0.0458 0.3864 2.1 3mkc-a3-m1-cA_3mkc-a3-m6-cA
10 3mkc-a3-m1-cA 371 44 0.2931 0.0458 0.3864 2.1 3mkc-a3-m1-cA_3mkc-a3-m6-cA
11 3mkc-a2-m8-cA 371 44 0.2931 0.0458 0.3864 2.1 3mkc-a2-m6-cA_3mkc-a2-m8-cA
12 3mkc-a2-m6-cA 371 44 0.2931 0.0458 0.3864 2.1 3mkc-a2-m6-cA_3mkc-a2-m8-cA
13 3dtb-a3-m1-cB 612 21 0.1724 0.0163 0.4762 6.3 3dtb-a3-m1-cB_3dtb-a3-m1-cA
14 3dtb-a3-m1-cA 620 21 0.1724 0.0161 0.4762 6.4 3dtb-a3-m1-cB_3dtb-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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