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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
PWEEPRSKSKICANVFCGAGRECAVTEKGEPTCLCIEQCKPHKRPVCGSNGKTYLNHCEL
HRDACLTGSKIQVDYDGHCKE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6jza-a1-m2-cA 81 81 1.0000 1.0000 1.0000 1.89e-56 6jza-a1-m1-cA_6jza-a1-m2-cA
2 6jza-a1-m1-cA 81 81 1.0000 1.0000 1.0000 1.89e-56 6jza-a1-m1-cA_6jza-a1-m2-cA
3 3hh2-a1-m1-cC 278 74 0.3704 0.1079 0.4054 2.73e-11 3hh2-a1-m1-cD_3hh2-a1-m1-cC
4 3hh2-a1-m1-cC 278 70 0.2840 0.0827 0.3286 1.81e-06 3hh2-a1-m1-cD_3hh2-a1-m1-cC
5 3hh2-a1-m1-cC 278 74 0.3210 0.0935 0.3514 1.67e-04 3hh2-a1-m1-cD_3hh2-a1-m1-cC
6 3hh2-a1-m1-cD 275 74 0.3580 0.1055 0.3919 9.88e-09 3hh2-a1-m1-cD_3hh2-a1-m1-cC
7 3hh2-a1-m1-cD 275 70 0.2840 0.0836 0.3286 5.38e-08 3hh2-a1-m1-cD_3hh2-a1-m1-cC
8 3hh2-a1-m1-cD 275 74 0.3210 0.0945 0.3514 1.79e-04 3hh2-a1-m1-cD_3hh2-a1-m1-cC
9 7kbu-a1-m1-cA 221 78 0.3457 0.1267 0.3590 2.59e-05 7kbu-a1-m1-cB_7kbu-a1-m1-cA
10 1bmo-a1-m1-cB 233 79 0.2716 0.0944 0.2785 0.025 1bmo-a1-m1-cA_1bmo-a1-m1-cB
11 1bmo-a1-m1-cA 233 79 0.2716 0.0944 0.2785 0.025 1bmo-a1-m1-cA_1bmo-a1-m1-cB
12 1ovo-a3-m5-cD 56 41 0.1728 0.2500 0.3415 0.041 1ovo-a3-m3-cD_1ovo-a3-m5-cD
13 1ovo-a3-m3-cD 56 41 0.1728 0.2500 0.3415 0.041 1ovo-a3-m3-cD_1ovo-a3-m5-cD
14 1ovo-a2-m5-cC 56 41 0.1728 0.2500 0.3415 0.041 1ovo-a2-m4-cC_1ovo-a2-m5-cC
15 1ovo-a2-m4-cC 56 41 0.1728 0.2500 0.3415 0.041 1ovo-a2-m4-cC_1ovo-a2-m5-cC
16 3idf-a1-m1-cA 138 72 0.2222 0.1304 0.2500 0.064 3idf-a1-m1-cB_3idf-a1-m1-cA
17 3idf-a1-m1-cB 135 72 0.2222 0.1333 0.2500 0.071 3idf-a1-m1-cB_3idf-a1-m1-cA
18 7kbu-a1-m1-cB 192 40 0.2099 0.0885 0.4250 0.16 7kbu-a1-m1-cB_7kbu-a1-m1-cA
19 4ovo-a2-m4-cA 56 41 0.1605 0.2321 0.3171 0.19 4ovo-a2-m2-cA_4ovo-a2-m4-cA, 4ovo-a2-m3-cA_4ovo-a2-m4-cA
20 4ovo-a2-m3-cA 56 41 0.1605 0.2321 0.3171 0.19 4ovo-a2-m3-cA_4ovo-a2-m4-cA
21 4ovo-a2-m2-cA 56 41 0.1605 0.2321 0.3171 0.19 4ovo-a2-m2-cA_4ovo-a2-m4-cA
22 3p9x-a1-m1-cA 195 33 0.1481 0.0615 0.3636 1.1 3p9x-a1-m1-cB_3p9x-a1-m1-cA
23 3p9x-a1-m1-cB 194 33 0.1481 0.0619 0.3636 1.2 3p9x-a1-m1-cB_3p9x-a1-m1-cA
24 2jbr-a1-m1-cD 399 46 0.1728 0.0351 0.3043 3.4 2jbr-a1-m1-cA_2jbr-a1-m1-cD, 2jbr-a1-m1-cC_2jbr-a1-m1-cD
25 2jbr-a1-m1-cC 399 46 0.1728 0.0351 0.3043 3.4 2jbr-a1-m1-cC_2jbr-a1-m1-cD
26 2jbr-a1-m1-cA 399 46 0.1728 0.0351 0.3043 3.4 2jbr-a1-m1-cA_2jbr-a1-m1-cD
27 5upt-a1-m2-cA 504 12 0.1235 0.0198 0.8333 9.2 5upt-a1-m1-cA_5upt-a1-m2-cA
28 5upt-a1-m1-cA 504 12 0.1235 0.0198 0.8333 9.2 5upt-a1-m1-cA_5upt-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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