Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
PYYQWNFAPVVRGIARTQARVEVLRDGYTVSNELVPSGPFELANLPGSGELKVIIHESDG
TKQVFTVPYDTPAVA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3fcg-a1-m1-cA 75 75 1.0000 1.0000 1.0000 2.20e-51 3fcg-a1-m1-cB_3fcg-a1-m1-cA
2 3fcg-a1-m1-cB 71 74 0.9467 1.0000 0.9595 2.76e-46 3fcg-a1-m1-cB_3fcg-a1-m1-cA
3 3rfz-a3-m2-cE 778 74 0.4533 0.0437 0.4595 1.22e-15 3rfz-a3-m1-cB_3rfz-a3-m2-cE
4 3rfz-a3-m1-cB 778 74 0.4533 0.0437 0.4595 1.22e-15 3rfz-a3-m1-cB_3rfz-a3-m2-cE
5 3ohn-a3-m1-cA 468 66 0.4000 0.0641 0.4545 2.72e-14 3ohn-a3-m3-cB_3ohn-a3-m1-cA
6 3ohn-a2-m1-cA 468 66 0.4000 0.0641 0.4545 2.72e-14 3ohn-a2-m2-cB_3ohn-a2-m1-cA
7 3ohn-a3-m3-cB 463 66 0.4000 0.0648 0.4545 7.42e-14 3ohn-a3-m3-cB_3ohn-a3-m1-cA
8 3ohn-a2-m2-cB 463 66 0.4000 0.0648 0.4545 7.42e-14 3ohn-a2-m2-cB_3ohn-a2-m1-cA
9 5gnh-a1-m1-cB 506 28 0.1333 0.0198 0.3571 3.2 5gnh-a1-m1-cA_5gnh-a1-m1-cB
10 5gnh-a1-m1-cA 506 28 0.1333 0.0198 0.3571 3.3 5gnh-a1-m1-cA_5gnh-a1-m1-cB
11 4liu-a1-m2-cA 351 54 0.2400 0.0513 0.3333 5.5 4liu-a1-m1-cA_4liu-a1-m2-cA
12 4liu-a1-m1-cA 351 54 0.2400 0.0513 0.3333 5.5 4liu-a1-m1-cA_4liu-a1-m2-cA
13 6tv2-a4-m3-cF 372 21 0.1333 0.0269 0.4762 5.6 6tv2-a4-m1-cD_6tv2-a4-m3-cF
14 6tv2-a4-m1-cD 372 21 0.1333 0.0269 0.4762 5.6 6tv2-a4-m1-cD_6tv2-a4-m3-cF
15 2dvm-a2-m1-cC 438 36 0.1867 0.0320 0.3889 5.6 2dvm-a2-m1-cD_2dvm-a2-m1-cC
16 2dvm-a2-m1-cD 436 36 0.1867 0.0321 0.3889 5.8 2dvm-a2-m1-cD_2dvm-a2-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600