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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
QAEEDSLDVKDHKLLLFQEVTGLISTWVTSIVEEADWDFERALKLFIQKNADHEIPDLAF
ALSKADKRSLAVARAELVLEQIQQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6opf-a1-m1-cB 84 84 1.0000 1.0000 1.0000 4.08e-55 6opf-a1-m1-cB_6opf-a1-m1-cA
2 6opf-a1-m1-cA 85 85 1.0000 0.9882 0.9882 2.10e-53 6opf-a1-m1-cB_6opf-a1-m1-cA
3 5ewu-a1-m1-cA 383 86 0.2262 0.0496 0.2209 0.61 5ewu-a1-m1-cB_5ewu-a1-m1-cA
4 4zhj-a1-m1-cA 1258 44 0.1667 0.0111 0.3182 2.1 4zhj-a1-m1-cB_4zhj-a1-m1-cA
5 4zhj-a1-m1-cB 1233 44 0.1667 0.0114 0.3182 2.2 4zhj-a1-m1-cB_4zhj-a1-m1-cA
6 2rgr-a1-m2-cA 721 61 0.2500 0.0291 0.3443 2.3 2rgr-a1-m1-cA_2rgr-a1-m2-cA
7 2rgr-a1-m1-cA 721 61 0.2500 0.0291 0.3443 2.3 2rgr-a1-m1-cA_2rgr-a1-m2-cA
8 4wp2-a1-m1-cB 57 40 0.1548 0.2281 0.3250 2.4 4wp2-a1-m1-cB_4wp2-a1-m1-cA
9 4wp2-a1-m1-cG 60 40 0.1548 0.2167 0.3250 2.5 4wp2-a1-m1-cF_4wp2-a1-m1-cG
10 4wp2-a1-m1-cA 60 40 0.1548 0.2167 0.3250 2.5 4wp2-a1-m1-cB_4wp2-a1-m1-cA
11 4wp2-a1-m1-cF 55 40 0.1548 0.2364 0.3250 2.6 4wp2-a1-m1-cF_4wp2-a1-m1-cG
12 5ewu-a1-m1-cB 377 44 0.1429 0.0318 0.2727 3.4 5ewu-a1-m1-cB_5ewu-a1-m1-cA
13 1aip-a2-m1-cH 194 35 0.1429 0.0619 0.3429 5.3 1aip-a2-m1-cH_1aip-a2-m1-cG
14 1aip-a2-m1-cG 195 35 0.1429 0.0615 0.3429 5.4 1aip-a2-m1-cH_1aip-a2-m1-cG
15 3ws7-a2-m2-cA 293 30 0.1429 0.0410 0.4000 6.7 3ws7-a2-m1-cA_3ws7-a2-m2-cA
16 3ws7-a2-m1-cA 293 30 0.1429 0.0410 0.4000 6.7 3ws7-a2-m1-cA_3ws7-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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