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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
QAEEDSLDVKDHKLLLFQEVTGLISTWVTSIVEEADWDFERALKLFIQKNADHEIPDLAF
ANLSKADKRSLAVARAELVLEQIQQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6opf-a1-m1-cA 85 85 1.0000 1.0000 1.0000 3.40e-56 6opf-a1-m1-cB_6opf-a1-m1-cA
2 6opf-a1-m1-cB 84 85 0.9882 1.0000 0.9882 2.12e-53 6opf-a1-m1-cB_6opf-a1-m1-cA
3 5ewu-a1-m1-cA 383 87 0.2235 0.0496 0.2184 0.91 5ewu-a1-m1-cB_5ewu-a1-m1-cA
4 4zhj-a1-m1-cA 1258 44 0.1647 0.0111 0.3182 2.3 4zhj-a1-m1-cB_4zhj-a1-m1-cA
5 4zhj-a1-m1-cB 1233 44 0.1647 0.0114 0.3182 2.4 4zhj-a1-m1-cB_4zhj-a1-m1-cA
6 4wp2-a1-m1-cB 57 40 0.1529 0.2281 0.3250 2.9 4wp2-a1-m1-cB_4wp2-a1-m1-cA
7 4wp2-a1-m1-cG 60 40 0.1529 0.2167 0.3250 2.9 4wp2-a1-m1-cF_4wp2-a1-m1-cG
8 4wp2-a1-m1-cA 60 40 0.1529 0.2167 0.3250 2.9 4wp2-a1-m1-cB_4wp2-a1-m1-cA
9 4wp2-a1-m1-cF 55 40 0.1529 0.2364 0.3250 3.0 4wp2-a1-m1-cF_4wp2-a1-m1-cG
10 7tej-a1-m1-cR 197 69 0.2000 0.0863 0.2464 3.0 7tej-a1-m1-cR_7tej-a1-m1-cQ
11 3oe8-a2-m1-cB 426 15 0.1176 0.0235 0.6667 3.3 3oe8-a2-m1-cB_3oe8-a2-m1-cA, 3oe8-a2-m1-cB_3oe8-a2-m1-cC
12 3oe8-a2-m1-cA 433 15 0.1176 0.0231 0.6667 3.5 3oe8-a2-m1-cB_3oe8-a2-m1-cA
13 3oe0-a1-m2-cA 433 15 0.1176 0.0231 0.6667 3.6 3oe0-a1-m1-cA_3oe0-a1-m2-cA
14 3oe0-a1-m1-cA 433 15 0.1176 0.0231 0.6667 3.6 3oe0-a1-m1-cA_3oe0-a1-m2-cA
15 3odu-a1-m1-cA 466 15 0.1176 0.0215 0.6667 3.6 3odu-a1-m1-cB_3odu-a1-m1-cA
16 3odu-a1-m1-cB 456 15 0.1176 0.0219 0.6667 3.7 3odu-a1-m1-cB_3odu-a1-m1-cA
17 5ewu-a1-m1-cB 377 44 0.1412 0.0318 0.2727 3.8 5ewu-a1-m1-cB_5ewu-a1-m1-cA
18 1aip-a2-m1-cG 195 35 0.1412 0.0615 0.3429 5.3 1aip-a2-m1-cH_1aip-a2-m1-cG
19 1aip-a2-m1-cH 194 35 0.1412 0.0619 0.3429 5.3 1aip-a2-m1-cH_1aip-a2-m1-cG
20 4bst-a1-m1-cA 457 15 0.1176 0.0219 0.6667 9.3 4bst-a1-m1-cA_4bst-a1-m1-cB
21 4bst-a1-m1-cB 458 15 0.1176 0.0218 0.6667 9.3 4bst-a1-m1-cA_4bst-a1-m1-cB
22 4kng-a1-m1-cA 461 15 0.1176 0.0217 0.6667 9.3 4kng-a1-m1-cA_4kng-a1-m1-cB
23 4kng-a1-m1-cB 463 15 0.1176 0.0216 0.6667 9.4 4kng-a1-m1-cA_4kng-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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