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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
QAIGSLETKGFPPILAAADAMVKAGRITIVSYMRAGSARFAVNIRGDVSEVKTAMDAGIE
AAKNTPGGTLETWVIIPRPHENVEAVFPIGFGP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ox6-a1-m3-cA 103 93 1.0000 0.9029 1.0000 1.03e-63 4ox6-a1-m3-cB_4ox6-a1-m3-cA
2 4ox6-a1-m3-cB 93 93 1.0000 1.0000 1.0000 1.30e-63 4ox6-a1-m3-cB_4ox6-a1-m3-cA
3 2a10-a1-m1-cE 102 93 0.7419 0.6765 0.7419 4.25e-44 2a10-a1-m1-cD_2a10-a1-m1-cE
4 2a10-a1-m1-cD 102 93 0.7419 0.6765 0.7419 4.25e-44 2a10-a1-m1-cD_2a10-a1-m1-cE
5 3dnc-a1-m6-cA 90 88 0.5161 0.5333 0.5455 1.75e-29 3dnc-a1-m2-cA_3dnc-a1-m6-cA
6 3dnc-a1-m2-cA 90 88 0.5161 0.5333 0.5455 1.75e-29 3dnc-a1-m2-cA_3dnc-a1-m6-cA
7 3ssq-a1-m2-cC 100 90 0.5054 0.4700 0.5222 3.71e-29 3ssq-a1-m1-cC_3ssq-a1-m2-cC
8 3ssq-a1-m1-cC 100 90 0.5054 0.4700 0.5222 3.71e-29 3ssq-a1-m1-cC_3ssq-a1-m2-cC
9 6owg-a1-m1-cDA 100 90 0.4946 0.4600 0.5111 3.99e-28 6owg-a1-m1-cC8_6owg-a1-m1-cDA
10 6owg-a1-m1-cC8 100 90 0.4946 0.4600 0.5111 3.99e-28 6owg-a1-m1-cC8_6owg-a1-m1-cDA
11 6owf-a1-m1-cW 100 90 0.4946 0.4600 0.5111 3.99e-28 6owf-a1-m1-cA6_6owf-a1-m1-cW
12 6owf-a1-m1-cA6 100 90 0.4946 0.4600 0.5111 3.99e-28 6owf-a1-m1-cA6_6owf-a1-m1-cW
13 3mpy-a1-m6-cA 96 91 0.4194 0.4062 0.4286 4.97e-15 3mpy-a1-m2-cA_3mpy-a1-m6-cA
14 3mpy-a1-m2-cA 96 91 0.4194 0.4062 0.4286 4.97e-15 3mpy-a1-m2-cA_3mpy-a1-m6-cA
15 5d6v-a1-m6-cA 90 88 0.3978 0.4111 0.4205 6.51e-14 5d6v-a1-m2-cA_5d6v-a1-m6-cA
16 5d6v-a1-m2-cA 90 88 0.3978 0.4111 0.4205 6.51e-14 5d6v-a1-m2-cA_5d6v-a1-m6-cA
17 4axj-a1-m1-cA 87 88 0.4194 0.4483 0.4432 3.97e-12 4axj-a1-m2-cC_4axj-a1-m1-cA
18 4axj-a1-m2-cC 86 88 0.4194 0.4535 0.4432 4.05e-12 4axj-a1-m2-cC_4axj-a1-m1-cA
19 7mmx-a2-m1-cD 86 87 0.3978 0.4302 0.4253 5.91e-11 7mmx-a2-m3-cF_7mmx-a2-m1-cD
20 7mmx-a2-m3-cF 85 87 0.3978 0.4353 0.4253 6.03e-11 7mmx-a2-m3-cF_7mmx-a2-m1-cD
21 7ckc-a1-m1-cCz 89 87 0.3333 0.3483 0.3563 7.54e-11 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
22 7ckc-a1-m1-cBi 89 87 0.3333 0.3483 0.3563 7.54e-11 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
23 2ewh-a1-m6-cA 92 87 0.3333 0.3370 0.3563 8.91e-11 2ewh-a1-m2-cA_2ewh-a1-m6-cA
24 2ewh-a1-m2-cA 92 87 0.3333 0.3370 0.3563 8.91e-11 2ewh-a1-m2-cA_2ewh-a1-m6-cA
25 7mgp-a1-m6-cA 93 87 0.3333 0.3333 0.3563 2.21e-10 7mgp-a1-m2-cA_7mgp-a1-m6-cA
26 7mgp-a1-m2-cA 93 87 0.3333 0.3333 0.3563 2.21e-10 7mgp-a1-m2-cA_7mgp-a1-m6-cA
27 3pac-a1-m3-cA 183 86 0.3441 0.1749 0.3721 1.28e-06 3pac-a1-m2-cA_3pac-a1-m3-cA
28 3pac-a1-m3-cA 183 83 0.2581 0.1311 0.2892 0.001 3pac-a1-m2-cA_3pac-a1-m3-cA
29 3pac-a1-m2-cA 183 86 0.3441 0.1749 0.3721 1.28e-06 3pac-a1-m2-cA_3pac-a1-m3-cA
30 3pac-a1-m2-cA 183 83 0.2581 0.1311 0.2892 0.001 3pac-a1-m2-cA_3pac-a1-m3-cA
31 3nwg-a2-m3-cA 174 85 0.2688 0.1437 0.2941 2.56e-05 3nwg-a2-m2-cA_3nwg-a2-m3-cA
32 3nwg-a2-m2-cA 174 85 0.2688 0.1437 0.2941 2.56e-05 3nwg-a2-m2-cA_3nwg-a2-m3-cA
33 3nwg-a1-m6-cA 174 85 0.2688 0.1437 0.2941 2.56e-05 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
34 3nwg-a1-m3-cA 174 85 0.2688 0.1437 0.2941 2.56e-05 3nwg-a1-m3-cA_3nwg-a1-m6-cA
35 3nwg-a1-m1-cA 174 85 0.2688 0.1437 0.2941 2.56e-05 3nwg-a1-m1-cA_3nwg-a1-m6-cA
36 1lss-a1-m2-cD 132 59 0.2151 0.1515 0.3390 3.0 1lss-a1-m1-cD_1lss-a1-m2-cD, 1lss-a1-m2-cC_1lss-a1-m2-cD
37 1lss-a1-m2-cC 132 59 0.2151 0.1515 0.3390 3.0 1lss-a1-m2-cA_1lss-a1-m2-cC, 1lss-a1-m2-cC_1lss-a1-m2-cD
38 1lss-a1-m2-cA 132 59 0.2151 0.1515 0.3390 3.0 1lss-a1-m2-cA_1lss-a1-m2-cC
39 1lss-a1-m1-cD 132 59 0.2151 0.1515 0.3390 3.0 1lss-a1-m1-cD_1lss-a1-m2-cD
40 6kcx-a1-m2-cA 470 23 0.0968 0.0191 0.3913 7.7 6kcx-a1-m1-cA_6kcx-a1-m2-cA
41 6kcx-a1-m1-cA 470 23 0.0968 0.0191 0.3913 7.7 6kcx-a1-m1-cA_6kcx-a1-m2-cA
42 7mtq-a1-m1-cA 742 16 0.0968 0.0121 0.5625 9.1 7mtq-a1-m1-cA_7mtq-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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