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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
QAMVVKPLFPWDETLKFDHFSIILAPGALSESTPHEAGVIEHVVVISGELEMKIDGEWRT
LYPDQGVRFAGDKPHAYRNSSSRPVHFHSLIHYPR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6b8w-a1-m1-cB 95 95 1.0000 1.0000 1.0000 1.47e-67 6b8w-a1-m1-cA_6b8w-a1-m1-cB
2 6b8w-a1-m1-cA 95 95 1.0000 1.0000 1.0000 1.47e-67 6b8w-a1-m1-cA_6b8w-a1-m1-cB
3 1y9q-a1-m2-cA 173 91 0.3053 0.1676 0.3187 3.59e-09 1y9q-a1-m1-cA_1y9q-a1-m2-cA
4 1y9q-a1-m1-cA 173 91 0.3053 0.1676 0.3187 3.59e-09 1y9q-a1-m1-cA_1y9q-a1-m2-cA
5 3es1-a1-m2-cA 160 73 0.1789 0.1062 0.2329 7.74e-04 3es1-a1-m1-cA_3es1-a1-m2-cA
6 3es1-a1-m1-cA 160 73 0.1789 0.1062 0.2329 7.74e-04 3es1-a1-m1-cA_3es1-a1-m2-cA
7 8hfb-a1-m1-cA 319 68 0.2211 0.0658 0.3088 0.003 8hfb-a1-m1-cB_8hfb-a1-m1-cA
8 8hfb-a1-m1-cB 311 68 0.2211 0.0675 0.3088 0.004 8hfb-a1-m1-cB_8hfb-a1-m1-cA
9 4hwv-a1-m1-cB 487 63 0.1789 0.0349 0.2698 0.73 4hwv-a1-m1-cB_4hwv-a1-m1-cA
10 4hwv-a1-m1-cA 498 63 0.1789 0.0341 0.2698 0.87 4hwv-a1-m1-cB_4hwv-a1-m1-cA
11 6a53-a1-m1-cB 126 65 0.1895 0.1429 0.2769 1.7 6a53-a1-m1-cA_6a53-a1-m1-cB
12 6a53-a1-m1-cA 126 65 0.1895 0.1429 0.2769 1.7 6a53-a1-m1-cA_6a53-a1-m1-cB
13 4xai-a1-m1-cB 565 50 0.1579 0.0265 0.3000 2.6 4xai-a1-m1-cA_4xai-a1-m1-cB
14 4xai-a1-m1-cA 565 50 0.1579 0.0265 0.3000 2.6 4xai-a1-m1-cA_4xai-a1-m1-cB
15 1sq4-a1-m4-cA 258 55 0.1474 0.0543 0.2545 3.2 1sq4-a1-m4-cB_1sq4-a1-m4-cA
16 1sq4-a3-m4-cB 255 55 0.1474 0.0549 0.2545 3.4 1sq4-a3-m2-cB_1sq4-a3-m4-cB
17 1sq4-a3-m2-cB 255 55 0.1474 0.0549 0.2545 3.4 1sq4-a3-m2-cB_1sq4-a3-m4-cB
18 1sq4-a1-m4-cB 255 55 0.1474 0.0549 0.2545 3.4 1sq4-a1-m4-cB_1sq4-a1-m4-cA
19 5wy1-a1-m2-cA 1140 37 0.1158 0.0096 0.2973 9.3 5wy1-a1-m1-cA_5wy1-a1-m2-cA
20 5wy1-a1-m1-cA 1140 37 0.1158 0.0096 0.2973 9.3 5wy1-a1-m1-cA_5wy1-a1-m2-cA
21 2pn1-a1-m2-cA 301 58 0.1895 0.0598 0.3103 9.5 2pn1-a1-m1-cA_2pn1-a1-m2-cA
22 2pn1-a1-m1-cA 301 58 0.1895 0.0598 0.3103 9.5 2pn1-a1-m1-cA_2pn1-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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