Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
QCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLC
SCTTGYRLAPDQKSCKPAVPFPCGRVSVSHSPTTLTR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1x7a-a2-m2-cL 97 97 1.0000 1.0000 1.0000 2.43e-68 1x7a-a2-m1-cL_1x7a-a2-m2-cL
2 1x7a-a2-m1-cL 97 97 1.0000 1.0000 1.0000 2.43e-68 1x7a-a2-m1-cL_1x7a-a2-m2-cL
3 1edm-a1-m1-cC 39 35 0.3196 0.7949 0.8857 1.60e-16 1edm-a1-m1-cB_1edm-a1-m1-cC
4 1edm-a1-m1-cB 39 35 0.3196 0.7949 0.8857 1.60e-16 1edm-a1-m1-cB_1edm-a1-m1-cC
5 4cud-a1-m2-cA 122 71 0.2371 0.1885 0.3239 1.49e-04 4cud-a1-m1-cA_4cud-a1-m2-cA
6 4cud-a1-m2-cA 122 36 0.1649 0.1311 0.4444 1.60e-04 4cud-a1-m1-cA_4cud-a1-m2-cA
7 4cud-a1-m2-cA 122 33 0.1443 0.1148 0.4242 0.010 4cud-a1-m1-cA_4cud-a1-m2-cA
8 4cud-a1-m1-cA 122 71 0.2371 0.1885 0.3239 1.49e-04 4cud-a1-m1-cA_4cud-a1-m2-cA
9 4cud-a1-m1-cA 122 36 0.1649 0.1311 0.4444 1.60e-04 4cud-a1-m1-cA_4cud-a1-m2-cA
10 4cud-a1-m1-cA 122 33 0.1443 0.1148 0.4242 0.010 4cud-a1-m1-cA_4cud-a1-m2-cA
11 4d0f-a1-m2-cA 125 71 0.2371 0.1840 0.3239 1.54e-04 4d0f-a1-m1-cA_4d0f-a1-m2-cA
12 4d0f-a1-m2-cA 125 36 0.1649 0.1280 0.4444 1.68e-04 4d0f-a1-m1-cA_4d0f-a1-m2-cA
13 4d0f-a1-m2-cA 125 34 0.1443 0.1120 0.4118 0.011 4d0f-a1-m1-cA_4d0f-a1-m2-cA
14 4d0f-a1-m1-cA 125 71 0.2371 0.1840 0.3239 1.54e-04 4d0f-a1-m1-cA_4d0f-a1-m2-cA
15 4d0f-a1-m1-cA 125 36 0.1649 0.1280 0.4444 1.68e-04 4d0f-a1-m1-cA_4d0f-a1-m2-cA
16 4d0f-a1-m1-cA 125 34 0.1443 0.1120 0.4118 0.011 4d0f-a1-m1-cA_4d0f-a1-m2-cA
17 4bxw-a1-m1-cB 287 47 0.2062 0.0697 0.4255 3.74e-04 4bxw-a1-m1-cA_4bxw-a1-m1-cB
18 4bxw-a1-m1-cA 286 47 0.2062 0.0699 0.4255 3.78e-04 4bxw-a1-m1-cA_4bxw-a1-m1-cB
19 4d90-a3-m1-cA 127 35 0.1649 0.1260 0.4571 5.50e-04 4d90-a3-m1-cB_4d90-a3-m1-cA
20 4d90-a3-m1-cA 127 32 0.1649 0.1260 0.5000 0.042 4d90-a3-m1-cB_4d90-a3-m1-cA
21 4d90-a3-m1-cA 127 42 0.1753 0.1339 0.4048 0.16 4d90-a3-m1-cB_4d90-a3-m1-cA
22 4d90-a3-m1-cB 126 35 0.1649 0.1270 0.4571 5.66e-04 4d90-a3-m1-cB_4d90-a3-m1-cA
23 4d90-a3-m1-cB 126 42 0.1753 0.1349 0.4048 0.16 4d90-a3-m1-cB_4d90-a3-m1-cA
24 4d90-a3-m1-cB 126 32 0.1546 0.1190 0.4688 0.41 4d90-a3-m1-cB_4d90-a3-m1-cA
25 5fm9-a1-m2-cA 154 36 0.1753 0.1104 0.4722 0.005 5fm9-a1-m1-cA_5fm9-a1-m2-cA
26 5fm9-a1-m2-cA 154 48 0.2062 0.1299 0.4167 0.025 5fm9-a1-m1-cA_5fm9-a1-m2-cA
27 5fm9-a1-m2-cA 154 32 0.1443 0.0909 0.4375 0.43 5fm9-a1-m1-cA_5fm9-a1-m2-cA
28 5fm9-a1-m1-cA 154 36 0.1753 0.1104 0.4722 0.005 5fm9-a1-m1-cA_5fm9-a1-m2-cA
29 5fm9-a1-m1-cA 154 48 0.2062 0.1299 0.4167 0.025 5fm9-a1-m1-cA_5fm9-a1-m2-cA
30 5fm9-a1-m1-cA 154 32 0.1443 0.0909 0.4375 0.43 5fm9-a1-m1-cA_5fm9-a1-m2-cA
31 8em7-a1-m1-cB 4378 36 0.1340 0.0030 0.3611 0.067 8em7-a1-m1-cA_8em7-a1-m1-cB
32 8em7-a1-m1-cB 4378 68 0.2268 0.0050 0.3235 1.2 8em7-a1-m1-cA_8em7-a1-m1-cB
33 8em7-a1-m1-cB 4378 34 0.1237 0.0027 0.3529 2.6 8em7-a1-m1-cA_8em7-a1-m1-cB
34 8em7-a1-m1-cA 4378 36 0.1340 0.0030 0.3611 0.067 8em7-a1-m1-cA_8em7-a1-m1-cB
35 8em7-a1-m1-cA 4378 68 0.2268 0.0050 0.3235 1.2 8em7-a1-m1-cA_8em7-a1-m1-cB
36 8em7-a1-m1-cA 4378 34 0.1237 0.0027 0.3529 2.6 8em7-a1-m1-cA_8em7-a1-m1-cB
37 8em4-a1-m1-cB 3818 36 0.1340 0.0034 0.3611 0.067 8em4-a1-m1-cA_8em4-a1-m1-cB
38 8em4-a1-m1-cB 3818 68 0.2268 0.0058 0.3235 1.3 8em4-a1-m1-cA_8em4-a1-m1-cB
39 8em4-a1-m1-cB 3818 34 0.1237 0.0031 0.3529 2.6 8em4-a1-m1-cA_8em4-a1-m1-cB
40 8em4-a1-m1-cA 3818 36 0.1340 0.0034 0.3611 0.067 8em4-a1-m1-cA_8em4-a1-m1-cB
41 8em4-a1-m1-cA 3818 68 0.2268 0.0058 0.3235 1.3 8em4-a1-m1-cA_8em4-a1-m1-cB
42 8em4-a1-m1-cA 3818 34 0.1237 0.0031 0.3529 2.6 8em4-a1-m1-cA_8em4-a1-m1-cB
43 7e3s-a1-m1-cB 155 14 0.1031 0.0645 0.7143 0.71 7e3s-a1-m1-cA_7e3s-a1-m1-cB
44 7e3s-a1-m1-cA 145 14 0.1031 0.0690 0.7143 0.75 7e3s-a1-m1-cA_7e3s-a1-m1-cB
45 4msv-a1-m3-cA 139 59 0.1649 0.1151 0.2712 1.7 4msv-a1-m2-cA_4msv-a1-m3-cA
46 4msv-a1-m2-cA 139 59 0.1649 0.1151 0.2712 1.7 4msv-a1-m2-cA_4msv-a1-m3-cA
47 1jl9-a1-m1-cA 42 30 0.1134 0.2619 0.3667 8.4 1jl9-a1-m1-cA_1jl9-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600