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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
QDCPECTLQENPFFSQPGAPILQCMGCCFSRAYPTPLRSKKTMLVQKNVTSESTCCVAKS
YNRVTVMGGFKVENHTACHCSTCYYHKS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1fl7-a3-m1-cC 88 88 1.0000 1.0000 1.0000 1.41e-62 1fl7-a3-m1-cA_1fl7-a3-m1-cC
2 1fl7-a3-m1-cA 86 86 0.9773 1.0000 1.0000 3.10e-61 1fl7-a3-m1-cA_1fl7-a3-m1-cC
3 7fb3-a1-m1-cA 1045 48 0.1477 0.0124 0.2708 2.2 7fb3-a1-m1-cC_7fb3-a1-m1-cA
4 7wuh-a1-m1-cE 1044 48 0.1477 0.0125 0.2708 2.3 7wuh-a1-m1-cA_7wuh-a1-m1-cE
5 7edg-a1-m1-cA 1015 48 0.1477 0.0128 0.2708 2.3 7edg-a1-m1-cC_7edg-a1-m1-cA
6 7wuh-a1-m1-cA 1038 48 0.1477 0.0125 0.2708 2.3 7wuh-a1-m1-cA_7wuh-a1-m1-cE
7 8hhx-a1-m1-cB 1008 48 0.1477 0.0129 0.2708 2.3 8hhx-a1-m1-cA_8hhx-a1-m1-cB
8 7q0a-a1-m1-cB 984 48 0.1477 0.0132 0.2708 2.4 7q0a-a1-m1-cB_7q0a-a1-m1-cC
9 7nda-a1-m1-cC 1012 48 0.1477 0.0128 0.2708 2.4 7nda-a1-m1-cB_7nda-a1-m1-cC
10 7fcd-a1-m1-cA 1007 48 0.1477 0.0129 0.2708 2.4 7fcd-a1-m1-cA_7fcd-a1-m1-cC
11 7fb4-a1-m1-cA 851 48 0.1477 0.0153 0.2708 2.5 7fb4-a1-m1-cA_7fb4-a1-m1-cC
12 7ndb-a1-m1-cA 993 48 0.1477 0.0131 0.2708 2.6 7ndb-a1-m1-cA_7ndb-a1-m1-cC
13 7edh-a1-m1-cA 819 48 0.1477 0.0159 0.2708 2.7 7edh-a1-m1-cA_7edh-a1-m1-cB
14 3vzh-a2-m2-cA 194 25 0.1591 0.0722 0.5600 2.9 3vzh-a2-m1-cA_3vzh-a2-m2-cA
15 3vzh-a2-m1-cA 194 25 0.1591 0.0722 0.5600 2.9 3vzh-a2-m1-cA_3vzh-a2-m2-cA
16 7wev-a1-m1-cB 1025 48 0.1591 0.0137 0.2917 3.0 7wev-a1-m1-cB_7wev-a1-m1-cC
17 7ddn-a1-m1-cA 1066 48 0.1591 0.0131 0.2917 3.0 7ddn-a1-m1-cA_7ddn-a1-m1-cC
18 6z97-a1-m1-cA 995 48 0.1591 0.0141 0.2917 3.0 6z97-a1-m1-cC_6z97-a1-m1-cA
19 7fb3-a1-m1-cC 1042 48 0.1591 0.0134 0.2917 4.2 7fb3-a1-m1-cB_7fb3-a1-m1-cC, 7fb3-a1-m1-cC_7fb3-a1-m1-cA
20 7fb4-a1-m1-cC 1043 48 0.1591 0.0134 0.2917 4.3 7fb4-a1-m1-cA_7fb4-a1-m1-cC, 7fb4-a1-m1-cB_7fb4-a1-m1-cC
21 7nda-a1-m1-cB 1003 48 0.1591 0.0140 0.2917 4.4 7nda-a1-m1-cB_7nda-a1-m1-cC
22 7fb1-a1-m1-cC 1029 48 0.1591 0.0136 0.2917 4.4 7fb1-a1-m1-cC_7fb1-a1-m1-cB
23 7fcd-a1-m1-cC 1027 48 0.1591 0.0136 0.2917 4.7 7fcd-a1-m1-cA_7fcd-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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