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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
QDFRPGVYRHYKGDHYLALGLARADETDEVVVVYTRLYARAGLPSTRLLRIWNETVDTGA
GPQPRFAYVGHVTPE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3be3-a2-m2-cB 76 75 1.0000 0.9868 1.0000 3.76e-51 3be3-a2-m1-cA_3be3-a2-m2-cB, 3be3-a2-m1-cB_3be3-a2-m2-cB, 3be3-a2-m2-cA_3be3-a2-m2-cB
2 3be3-a2-m1-cB 76 75 1.0000 0.9868 1.0000 3.76e-51 3be3-a2-m1-cB_3be3-a2-m2-cB
3 3be3-a2-m2-cA 75 75 1.0000 1.0000 1.0000 4.60e-51 3be3-a2-m2-cA_3be3-a2-m2-cB
4 3be3-a2-m1-cA 75 75 1.0000 1.0000 1.0000 4.60e-51 3be3-a2-m1-cA_3be3-a2-m2-cB
5 4e51-a1-m1-cB 397 46 0.2133 0.0403 0.3478 0.95 4e51-a1-m1-cB_4e51-a1-m1-cA
6 2zw7-a1-m1-cB 290 42 0.2133 0.0552 0.3810 1.4 2zw7-a1-m1-cA_2zw7-a1-m1-cB
7 2zw7-a1-m1-cA 290 42 0.2133 0.0552 0.3810 1.4 2zw7-a1-m1-cA_2zw7-a1-m1-cB
8 6p74-a1-m2-cA 512 34 0.1733 0.0254 0.3824 3.0 6p74-a1-m1-cA_6p74-a1-m2-cA
9 6p74-a1-m1-cA 512 34 0.1733 0.0254 0.3824 3.0 6p74-a1-m1-cA_6p74-a1-m2-cA
10 4e51-a1-m1-cA 415 41 0.1867 0.0337 0.3415 3.3 4e51-a1-m1-cB_4e51-a1-m1-cA
11 7bqp-a1-m2-cA 449 57 0.2267 0.0379 0.2982 7.4 7bqp-a1-m1-cA_7bqp-a1-m2-cA
12 7bqp-a1-m1-cA 449 57 0.2267 0.0379 0.2982 7.4 7bqp-a1-m1-cA_7bqp-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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