Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=72)
QDITMELHCPLCNDWFRDPLMLSCGHNFCEACIQDFWRLQAKETFCPECKMLCQYNNCTF
NPVLDKLVEKIK

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 6yxe-a2-m2-cB 72 72 1.0000 1.0000 1.0000 7.14e-50 6yxe-a2-m1-cB_6yxe-a2-m2-cB
2 6yxe-a2-m1-cB 72 72 1.0000 1.0000 1.0000 7.14e-50 6yxe-a2-m1-cB_6yxe-a2-m2-cB
3 5eya-a1-m1-cF 76 52 0.2639 0.2500 0.3654 1.19e-10 5eya-a1-m1-cF_5eya-a1-m1-cG
4 5eya-a1-m1-cG 86 69 0.3333 0.2791 0.3478 1.58e-10 5eya-a1-m1-cF_5eya-a1-m1-cG
5 6fga-a4-m1-cH 77 67 0.3056 0.2857 0.3284 7.68e-08 6fga-a4-m1-cG_6fga-a4-m1-cH
6 6fga-a4-m1-cG 77 67 0.3056 0.2857 0.3284 7.68e-08 6fga-a4-m1-cG_6fga-a4-m1-cH
7 4whv-a2-m1-cJ 101 66 0.2778 0.1980 0.3030 1.25e-05 4whv-a2-m1-cI_4whv-a2-m1-cJ
8 4whv-a2-m1-cI 101 66 0.2778 0.1980 0.3030 1.25e-05 4whv-a2-m1-cI_4whv-a2-m1-cJ
9 4ayc-a1-m2-cB 126 62 0.2639 0.1508 0.3065 2.97e-05 4ayc-a1-m2-cB_4ayc-a1-m1-cA
10 4ayc-a1-m1-cA 136 66 0.2778 0.1471 0.3030 3.46e-05 4ayc-a1-m2-cB_4ayc-a1-m1-cA
11 7zj3-a2-m1-cG 85 44 0.2083 0.1765 0.3409 4.46e-05 7zj3-a2-m1-cG_7zj3-a2-m1-cA
12 7zj3-a2-m1-cA 86 44 0.2083 0.1744 0.3409 5.12e-05 7zj3-a2-m1-cG_7zj3-a2-m1-cA
13 2y43-a1-m1-cB 88 66 0.2778 0.2273 0.3030 3.91e-04 2y43-a1-m1-cA_2y43-a1-m1-cB
14 2y43-a1-m1-cA 88 66 0.2778 0.2273 0.3030 4.17e-04 2y43-a1-m1-cA_2y43-a1-m1-cB
15 4r7e-a1-m2-cA 69 43 0.2222 0.2319 0.3721 0.001 4r7e-a1-m1-cA_4r7e-a1-m2-cA
16 4r7e-a1-m1-cA 69 43 0.2222 0.2319 0.3721 0.001 4r7e-a1-m1-cA_4r7e-a1-m2-cA
17 5trb-a1-m2-cA 69 49 0.2222 0.2319 0.3265 0.002 5trb-a1-m1-cA_5trb-a1-m2-cA
18 5trb-a1-m1-cA 69 49 0.2222 0.2319 0.3265 0.002 5trb-a1-m1-cA_5trb-a1-m2-cA
19 1rmd-a1-m2-cA 116 48 0.2222 0.1379 0.3333 0.005 1rmd-a1-m1-cA_1rmd-a1-m2-cA
20 1rmd-a1-m1-cA 116 48 0.2222 0.1379 0.3333 0.005 1rmd-a1-m1-cA_1rmd-a1-m2-cA
21 5din-a1-m1-cA 120 72 0.3333 0.2000 0.3333 0.006 5din-a1-m1-cA_5din-a1-m1-cB
22 5din-a1-m1-cB 124 72 0.3333 0.1935 0.3333 0.006 5din-a1-m1-cA_5din-a1-m1-cB
23 5vnz-a1-m2-cA 108 36 0.1667 0.1111 0.3333 0.011 5vnz-a1-m1-cA_5vnz-a1-m2-cA
24 5vnz-a1-m1-cA 108 36 0.1667 0.1111 0.3333 0.011 5vnz-a1-m1-cA_5vnz-a1-m2-cA
25 3ztg-a1-m1-cB 92 48 0.2361 0.1848 0.3542 0.019 3ztg-a1-m1-cA_3ztg-a1-m1-cB
26 3ztg-a1-m1-cA 92 48 0.2361 0.1848 0.3542 0.019 3ztg-a1-m1-cA_3ztg-a1-m1-cB
27 5h7r-a1-m2-cD 124 47 0.2083 0.1210 0.3191 0.024 5h7r-a1-m1-cD_5h7r-a1-m2-cD
28 5h7r-a1-m1-cD 124 47 0.2083 0.1210 0.3191 0.024 5h7r-a1-m1-cD_5h7r-a1-m2-cD
29 3hcs-a1-m1-cB 157 30 0.1806 0.0828 0.4333 0.035 3hcs-a1-m1-cA_3hcs-a1-m1-cB
30 3hcs-a1-m1-cA 157 30 0.1806 0.0828 0.4333 0.035 3hcs-a1-m1-cA_3hcs-a1-m1-cB
31 4ppe-a2-m2-cB 67 67 0.2500 0.2687 0.2687 0.077 4ppe-a2-m1-cA_4ppe-a2-m2-cB, 4ppe-a2-m1-cB_4ppe-a2-m2-cB, 4ppe-a2-m2-cA_4ppe-a2-m2-cB
32 4ppe-a2-m1-cB 67 67 0.2500 0.2687 0.2687 0.077 4ppe-a2-m1-cB_4ppe-a2-m2-cB
33 4ppe-a2-m2-cA 66 67 0.2500 0.2727 0.2687 0.082 4ppe-a2-m2-cA_4ppe-a2-m2-cB
34 4ppe-a2-m1-cA 66 67 0.2500 0.2727 0.2687 0.082 4ppe-a2-m1-cA_4ppe-a2-m2-cB
35 6qaj-a1-m1-cB 441 49 0.2222 0.0363 0.3265 0.14 6qaj-a1-m1-cA_6qaj-a1-m1-cB
36 3fl7-a1-m2-cA 482 49 0.1806 0.0270 0.2653 0.73 3fl7-a1-m1-cA_3fl7-a1-m2-cA
37 3fl7-a1-m1-cA 482 49 0.1806 0.0270 0.2653 0.73 3fl7-a1-m1-cA_3fl7-a1-m2-cA
38 7z36-a1-m1-cB 446 49 0.2222 0.0359 0.3265 1.6 7z36-a1-m1-cA_7z36-a1-m1-cB
39 6qaj-a1-m1-cA 439 49 0.2222 0.0364 0.3265 1.7 6qaj-a1-m1-cA_6qaj-a1-m1-cB
40 5vzv-a2-m2-cB 76 46 0.2083 0.1974 0.3261 1.7 5vzv-a2-m1-cB_5vzv-a2-m2-cB
41 5vzv-a2-m1-cB 76 46 0.2083 0.1974 0.3261 1.7 5vzv-a2-m1-cB_5vzv-a2-m2-cB
42 7z36-a1-m1-cA 433 49 0.2222 0.0370 0.3265 2.0 7z36-a1-m1-cA_7z36-a1-m1-cB
43 4gu1-a3-m1-cB 746 40 0.1667 0.0161 0.3000 2.2 4gu1-a3-m1-cA_4gu1-a3-m1-cB
44 4gu1-a3-m1-cA 746 40 0.1667 0.0161 0.3000 2.2 4gu1-a3-m1-cA_4gu1-a3-m1-cB
45 4fwj-a3-m1-cA 750 40 0.1667 0.0160 0.3000 2.3 4fwj-a3-m1-cB_4fwj-a3-m1-cA
46 4eez-a2-m2-cA 339 36 0.1944 0.0413 0.3889 6.2 4eez-a2-m2-cA_4eez-a2-m2-cB
47 4eez-a2-m1-cA 339 36 0.1944 0.0413 0.3889 6.2 4eez-a2-m1-cA_4eez-a2-m2-cB
48 4eez-a2-m2-cB 342 36 0.1944 0.0409 0.3889 6.2 4eez-a2-m1-cA_4eez-a2-m2-cB, 4eez-a2-m1-cB_4eez-a2-m2-cB, 4eez-a2-m2-cA_4eez-a2-m2-cB
49 4eez-a2-m1-cB 342 36 0.1944 0.0409 0.3889 6.2 4eez-a2-m1-cB_4eez-a2-m2-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600