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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
QEAHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSRLFQALLDIQEFYELTLLDDSK
SIQQKTAETLQIATKWEKDGQAVKIADFIK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4rp3-a1-m1-cA 91 90 1.0000 0.9890 1.0000 6.96e-60 4rp3-a1-m1-cB_4rp3-a1-m1-cA
2 4rp3-a1-m1-cB 90 90 1.0000 1.0000 1.0000 7.88e-60 4rp3-a1-m1-cB_4rp3-a1-m1-cA
3 1rso-a1-m1-cC 60 58 0.4222 0.6333 0.6552 2.25e-21 1rso-a1-m1-cA_1rso-a1-m1-cC
4 1rso-a1-m1-cA 60 58 0.4222 0.6333 0.6552 2.25e-21 1rso-a1-m1-cA_1rso-a1-m1-cC
5 1wv2-a2-m2-cA 230 43 0.1778 0.0696 0.3721 0.21 1wv2-a2-m2-cB_1wv2-a2-m2-cA
6 1wv2-a2-m2-cB 223 43 0.1778 0.0717 0.3721 0.23 1wv2-a2-m1-cB_1wv2-a2-m2-cB, 1wv2-a2-m2-cB_1wv2-a2-m2-cA
7 1wv2-a2-m1-cB 223 43 0.1778 0.0717 0.3721 0.23 1wv2-a2-m1-cB_1wv2-a2-m2-cB
8 2wzr-a1-m9-c2 207 49 0.2111 0.0918 0.3878 0.31 2wzr-a1-m55-c2_2wzr-a1-m9-c2
9 2wzr-a1-m55-c2 207 49 0.2111 0.0918 0.3878 0.31 2wzr-a1-m55-c2_2wzr-a1-m9-c2
10 3m5u-a1-m1-cB 346 67 0.2222 0.0578 0.2985 0.37 3m5u-a1-m1-cA_3m5u-a1-m1-cB
11 3m5u-a1-m1-cA 346 67 0.2222 0.0578 0.2985 0.37 3m5u-a1-m1-cA_3m5u-a1-m1-cB
12 3ofg-a1-m1-cA 89 51 0.1667 0.1685 0.2941 1.0 3ofg-a1-m1-cB_3ofg-a1-m1-cA
13 3ofg-a1-m1-cB 85 51 0.1667 0.1765 0.2941 1.0 3ofg-a1-m1-cB_3ofg-a1-m1-cA
14 6a0k-a1-m1-cB 442 30 0.1333 0.0271 0.4000 6.6 6a0k-a1-m1-cB_6a0k-a1-m1-cA
15 6a0k-a1-m1-cA 450 30 0.1333 0.0267 0.4000 6.6 6a0k-a1-m1-cB_6a0k-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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