Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
QEGQRYQALKAHAEEKLQLANEEIAQVRSKAQAEALALQASLRKEQRIQSLEKTVEQKTK
ENEELTRICDDLISKEKI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5lxo-a1-m1-cB 78 78 1.0000 1.0000 1.0000 1.58e-48 5lxo-a1-m1-cA_5lxo-a1-m1-cB
2 5lxo-a1-m1-cA 78 77 0.9872 0.9872 1.0000 9.03e-48 5lxo-a1-m1-cA_5lxo-a1-m1-cB
3 4pky-a2-m1-cE 50 50 0.4615 0.7200 0.7200 9.32e-14 4pky-a2-m1-cF_4pky-a2-m1-cE
4 4pky-a2-m1-cF 49 47 0.4615 0.7347 0.7660 1.40e-13 4pky-a2-m1-cF_4pky-a2-m1-cE
5 2rfq-a1-m1-cC 370 26 0.1410 0.0297 0.4231 0.68 2rfq-a1-m1-cC_2rfq-a1-m1-cD
6 2rfq-a1-m1-cD 371 26 0.1410 0.0296 0.4231 0.68 2rfq-a1-m1-cC_2rfq-a1-m1-cD, 2rfq-a1-m1-cD_2rfq-a1-m1-cA
7 2rfq-a1-m1-cA 380 26 0.1410 0.0289 0.4231 0.68 2rfq-a1-m1-cD_2rfq-a1-m1-cA
8 5lvz-a1-m2-cA 235 19 0.1154 0.0383 0.4737 4.4 5lvz-a1-m1-cA_5lvz-a1-m2-cA
9 5lvz-a1-m1-cA 235 19 0.1154 0.0383 0.4737 4.4 5lvz-a1-m1-cA_5lvz-a1-m2-cA
10 1pix-a2-m2-cB 586 59 0.2692 0.0358 0.3559 5.3 1pix-a2-m1-cA_1pix-a2-m2-cB, 1pix-a2-m1-cB_1pix-a2-m2-cB, 1pix-a2-m2-cA_1pix-a2-m2-cB
11 1pix-a2-m2-cA 586 59 0.2692 0.0358 0.3559 5.3 1pix-a2-m2-cA_1pix-a2-m2-cB
12 1pix-a2-m1-cB 586 59 0.2692 0.0358 0.3559 5.3 1pix-a2-m1-cB_1pix-a2-m2-cB
13 1pix-a2-m1-cA 586 59 0.2692 0.0358 0.3559 5.3 1pix-a2-m1-cA_1pix-a2-m2-cB
14 2fp2-a1-m1-cB 163 61 0.2308 0.1104 0.2951 6.8 2fp2-a1-m1-cA_2fp2-a1-m1-cB
15 2fp2-a1-m1-cA 162 61 0.2308 0.1111 0.2951 7.2 2fp2-a1-m1-cA_2fp2-a1-m1-cB
16 7al1-a1-m2-cA 85 31 0.1667 0.1529 0.4194 8.0 7al1-a1-m1-cA_7al1-a1-m2-cA
17 7al1-a1-m1-cA 85 31 0.1667 0.1529 0.4194 8.0 7al1-a1-m1-cA_7al1-a1-m2-cA
18 4iqg-a1-m1-cD 244 38 0.1795 0.0574 0.3684 9.6 4iqg-a1-m1-cB_4iqg-a1-m1-cD, 4iqg-a1-m1-cC_4iqg-a1-m1-cD
19 4iqg-a1-m1-cC 243 38 0.1795 0.0576 0.3684 9.7 4iqg-a1-m1-cC_4iqg-a1-m1-cD
20 4iqg-a1-m1-cB 243 38 0.1795 0.0576 0.3684 9.7 4iqg-a1-m1-cB_4iqg-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600