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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
QEISKSIYTCNDNQVEVIYVNTEAGNAYAIISQVNEIPRLKANYEAIDKNYTYKLYTKGK
TAELVEGDDKPVLSNCSLA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3oe3-a2-m1-cB 79 79 1.0000 1.0000 1.0000 6.70e-53 3oe3-a2-m1-cB_3oe3-a2-m1-cD
2 3oe3-a2-m1-cD 83 82 1.0000 0.9518 0.9634 9.99e-51 3oe3-a2-m1-cB_3oe3-a2-m1-cD
3 6qkv-a1-m1-cA 149 53 0.1772 0.0940 0.2642 1.5 6qkv-a1-m1-cB_6qkv-a1-m1-cA
4 2a8j-a1-m1-cA 310 55 0.2405 0.0613 0.3455 5.9 2a8j-a1-m1-cA_2a8j-a1-m1-cB
5 2a8j-a1-m1-cB 313 55 0.2405 0.0607 0.3455 5.9 2a8j-a1-m1-cA_2a8j-a1-m1-cB
6 6vin-a1-m3-cB 364 55 0.2405 0.0522 0.3455 6.0 6vin-a1-m1-cA_6vin-a1-m3-cB, 6vin-a1-m3-cA_6vin-a1-m3-cB
7 6vin-a1-m3-cA 364 55 0.2405 0.0522 0.3455 6.0 6vin-a1-m3-cA_6vin-a1-m3-cB
8 6vin-a1-m1-cA 364 55 0.2405 0.0522 0.3455 6.0 6vin-a1-m1-cA_6vin-a1-m3-cB
9 1mi1-a1-m1-cB 392 37 0.1519 0.0306 0.3243 7.8 1mi1-a1-m1-cB_1mi1-a1-m1-cA
10 4ppz-a1-m2-cA 375 31 0.1772 0.0373 0.4516 8.2 4ppz-a1-m1-cA_4ppz-a1-m2-cA
11 4ppz-a1-m1-cA 375 31 0.1772 0.0373 0.4516 8.2 4ppz-a1-m1-cA_4ppz-a1-m2-cA
12 1mi1-a1-m1-cA 406 37 0.1519 0.0296 0.3243 8.5 1mi1-a1-m1-cB_1mi1-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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